Bacterial 45SRbgA ribosomal particle class B
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6ppf
Q-score: 0.436
Seffouh A, Jain N, Jahagirdar D, Basu K, Razi A, Ni X, Guarne A, Britton RA, Ortega J
Nucleic Acids Res (2019) 47 pp. 10414-10425 [ Pubmed: 31665744 DOI: doi:10.1093/nar/gkz770 ]
- 23s rrna (949 kDa, RNA from Bacillus subtilis)
- 50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l27 (10 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis)
- Water (18 Da, Ligand)
- 5s rrna (38 kDa, RNA from Bacillus subtilis)
- 45srbga ribosomal assembly intermediate (Complex from Bacillus subtilis)
- 50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis)
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 6ppk
Q-score: 0.354
Seffouh A, Jain N, Jahagirdar D, Basu K, Razi A, Ni X, Guarne A, Britton RA, Ortega J
Nucleic Acids Res (2019) 47 pp. 10414-10425 [ Pubmed: 31665744 DOI: doi:10.1093/nar/gkz770 ]
- Ribosome biogenesis gtpase a (32 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l6 (19 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l5 (20 kDa, Protein from Bacillus subtilis)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 23s rrna (949 kDa, RNA from Bacillus subtilis)
- 50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis)
- Rbga + 45srbga ribosomal assembly intermediate complex (Complex from Bacillus subtilis)
- 50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l27 (10 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis)
- 5s rrna (38 kDa, RNA from Bacillus subtilis)
- 50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis)
Bacterial 45SRbgA ribosomal particle class A
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6pvk
Q-score: 0.435
Seffouh A, Jain N, Jahagirdar D, Basu K, Razi A, Ni X, Guarne A, Britton RA, Ortega J
Nucleic Acids Res (2019) 47 pp. 10414-10425 [ Pubmed: 31665744 DOI: doi:10.1093/nar/gkz770 ]
- 23s rrna (949 kDa, RNA from Bacillus subtilis)
- 50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis)
- Water (18 Da, Ligand)
- 45srbga ribosomal assembly intermediate class a (Complex from Bacillus subtilis)
- 50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis)
- 50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis)
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Razi A, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR, Ortega J
Nucleic Acids Res (2019) 47 pp. 8301-8317 [ Pubmed: 31265110 DOI: doi:10.1093/nar/gkz571 ]
- 30s assembly intermediate (class d) (900 kDa, Complex from Escherichia coli)
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6nqb
Q-score: 0.332
Razi A, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR, Ortega J
Nucleic Acids Res (2019) 47 pp. 8301-8317 [ Pubmed: 31265110 DOI: doi:10.1093/nar/gkz571 ]
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- 16s ribosomal rna (499 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s5 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s19 (8 kDa, Protein from Escherichia coli H736)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (10 kDa, Protein from Escherichia coli)
- 30s assembly intermediate (class p) (900 kDa, Complex from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein bs16 (8 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (24 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli)
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Razi A, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR, Ortega J
Nucleic Acids Res (2019) 47 pp. 8301-8317 [ Pubmed: 31265110 DOI: doi:10.1093/nar/gkz571 ]
- Era-treated mature 30s subunit (900 kDa, Complex from Escherichia coli)
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Razi A, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR, Ortega J
Nucleic Acids Res (2019) 47 pp. 8301-8317 [ Pubmed: 31265110 DOI: doi:10.1093/nar/gkz571 ]
- Era+yjeq-treated mature 30s subunit (900 kDa, Complex from Escherichia coli)