Liu T, Cao L, Mladenov M, Jegou A, Way M, Moores CA
Nat Struct Mol Biol (2024) 31 pp. 801-809 [ DOI: doi:10.1038/s41594-023-01205-2 Pubmed: 38267598 ]
Liu T, Cao L, Mladenov M, Jegou A, Way M, Moores CA
Nat Struct Mol Biol (2024) 31 pp. 801-809 [ DOI: doi:10.1038/s41594-023-01205-2 Pubmed: 38267598 ]
Liu T, Cao L, Mladenov M, Jegou A, Way M, Moores CA
Nat Struct Mol Biol (2024) 31 pp. 801-809 [ DOI: doi:10.1038/s41594-023-01205-2 Pubmed: 38267598 ]
Liu T, Cao L, Mladenov M, Jegou A, Way M, Moores CA
Nat Struct Mol Biol (2024) 31 pp. 801-809 [ DOI: doi:10.1038/s41594-023-01205-2 Pubmed: 38267598 ]
Liu T, Cao L, Mladenov M, Jegou A, Way M, Moores CA
Nat Struct Mol Biol (2024) 31 pp. 801-809 [ DOI: doi:10.1038/s41594-023-01205-2 Pubmed: 38267598 ]
Cryo-EM structure of cortactin stabilized Arp2/3-complex nucleated actin branches
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8p94
Q-score: 0.452
Liu T, Cao L, Mladenov M, Jegou A, Way M, Moores CA
Nat Struct Mol Biol (2024) 31 pp. 801-809 [ DOI: doi:10.1038/s41594-023-01205-2 Pubmed: 38267598 ]
- Actin-related protein 2/3 complex subunit 1b (41 kDa, Protein from Homo sapiens)
- Actin-related protein 2/3 complex subunit 4 (19 kDa, Protein from Homo sapiens)
- Cortactin stabilizes arp2/3-complex nucleated actin branches with daughter filament capped (Complex from Homo sapiens)
- Src substrate cortactin (61 kDa, Protein from Mus musculus)
- Mouse cortactin (Complex from Mus musculus)
- Porcine actin, cytoplasmic 1 (Complex from Sus scrofa)
- Phalloidin (Complex from Amanita phalloides)
- Isoform 2 of f-actin-capping protein subunit beta (30 kDa, Protein from Mus musculus)
- Actin-related protein 2/3 complex subunit 5-like protein (16 kDa, Protein from Homo sapiens)
- Actin-related protein 3 (47 kDa, Protein from Homo sapiens)
- Human arp2/3 c1bc5l complex (Complex from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Actin-related protein 2/3 complex subunit 3 (20 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1 (41 kDa, Protein from Sus scrofa)
- Mouse capping protein (Complex from Mus musculus)
- Actin-related protein 2/3 complex subunit 2 (34 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Actin-related protein 2 (44 kDa, Protein from Homo sapiens)
- F-actin-capping protein subunit alpha-1 (32 kDa, Protein from Mus musculus)
- Phalloidin (808 Da, Protein from Amanita phalloides)
Cryo-EM structure of Dot1L and H2BK34ub-H3K79Nle nucleosome 1:1 complex
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 7xcr
Q-score: 0.571
Ai H, Sun M, Liu A, Sun Z, Liu T, Cao L, Liang L, Qu Q, Li Z, Deng Z, Tong Z, Chu G, Tian X, Deng H, Zhao S, Li JB, Lou Z, Liu L
Nat Chem Biol (2022) 18 pp. 972-980 [ Pubmed: 35739357 DOI: doi:10.1038/s41589-022-01067-7 ]
- Complex of dot1l(1-416) and h2bk34ub nucleosome (Complex from Homo sapiens)
- Dna (146-mer) (44 kDa, DNA from synthetic construct)
- Ubiquitin (8 kDa, Protein from Homo sapiens)
- Histone domain-containing protein (11 kDa, Protein from synthetic construct)
- Dna (146-mer) (45 kDa, DNA from synthetic construct)
- Histone h2b type 1-k (10 kDa, Protein from Homo sapiens)
- Histone h2a (11 kDa, Protein from Homo sapiens)
- Histone-lysine n-methyltransferase, h3 lysine-79 specific (37 kDa, Protein from Homo sapiens)
- Histone h4 (10 kDa, Protein from Homo sapiens)
- S-adenosylmethionine (398 Da, Ligand)
Cryo-EM structure of Dot1L and H2BK34ub-H3K79Nle nucleosome 2:1 complex
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 7xct
Q-score: 0.514
Ai H, Sun M, Liu A, Sun Z, Liu T, Cao L, Liang L, Qu Q, Li Z, Deng Z, Tong Z, Chu G, Tian X, Deng H, Zhao S, Li JB, Lou Z, Liu L
Nat Chem Biol (2022) 18 pp. 972-980 [ Pubmed: 35739357 DOI: doi:10.1038/s41589-022-01067-7 ]
- Histone domain-containing protein (11 kDa, Protein from Homo sapiens)
- Ubiquitin (8 kDa, Protein from Homo sapiens)
- Complex of dot1l(1-416) and h2bk34ub 2:1 nucleosome (Complex from Homo sapiens)
- Dna (145-mer) (44 kDa, DNA from synthetic construct)
- Histone h2b type 1-k (10 kDa, Protein from Homo sapiens)
- Histone h2a (11 kDa, Protein from Homo sapiens)
- Dna (145-mer) (44 kDa, DNA from synthetic construct)
- Histone h4 (10 kDa, Protein from Homo sapiens)
- Histone-lysine n-methyltransferase, h3 lysine-79 specific (37 kDa, Protein from Homo sapiens)
- S-adenosylmethionine (398 Da, Ligand)
cryo-EM map of Dot1L and H2BK34ub-H3K79Nle nucleosome complex containing addition map (1:1)
cryo-EM structure of H2BK34ub nucleosome
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 7xd0
Q-score: 0.457
Ai H, Sun M, Liu A, Sun Z, Liu T, Cao L, Liang L, Qu Q, Li Z, Deng Z, Tong Z, Chu G, Tian X, Deng H, Zhao S, Li JB, Lou Z, Liu L
Nat Chem Biol (2022) 18 pp. 972-980 [ Pubmed: 35739357 DOI: doi:10.1038/s41589-022-01067-7 ]
- Dna (146-mer) (44 kDa, DNA from synthetic construct)
- Histone h4 (9 kDa, Protein from Homo sapiens)
- Ubiquitin-60s ribosomal protein l40 (8 kDa, Protein from synthetic construct)
- H2bk34ub nucleosome (Complex from Homo sapiens)
- Dna (146-mer) (45 kDa, DNA from synthetic construct)
- Histone h2b type 1-k (10 kDa, Protein from synthetic construct)
- Histone domain-containing protein (11 kDa, Protein from Homo sapiens)
- Histone h2a (11 kDa, Protein from Homo sapiens)