SARS-2 CoV 6P Mut7 in complex with Fab J08
Andreano E, Nicastri E, Paciello I, Pileri P, Manganaro N, Piccini G, Manenti A, Pantano E, Kabanova A, Troisi M, Vacca F, Cardamone D, De Santi C, Torres JL, Ozorowski G, Benincasa L, Jang H, Di Genova C, Depau L, Brunetti J, Agrati C, Capobianchi MR, Castilleti C, Emiliozzi A, Fabianni M, Montagnani F, Bracci L, Sautto G, Ross T, Mantomoli E, Temperton N, Ward AB, Sala C, Ippolito G, Rappuoli R
To Be Published
SARS-2 CoV 6P Mut7 in complex with Fab F05
Andreano E, Nicastri E, Paciello I, Pileri P, Manganaro N, Piccini G, Manenti A, Pantano E, Kabanova A, Troisi M, Vacca F, Cardamone D, De Santi C, Torres JL, Ozorowski G, Benincasa L, Jang H, Di Genova C, Depau L, Brunetti J, Agrati C, Capobianchi MR, Castilleti C, Emiliozzi A, Fabianni M, Montagnani F, Bracci L, Sautto G, Ross T, Mantomoli E, Temperton N, Ward AB, Sala C, Ippolito G, Rappuoli R
To Be Published
SARS-2 CoV 6P Mut 7 in complex with fragment antigen binding (fab) I14
Andreano E, Nicastri E, Paciello I, Pileri P, Manganaro N, Piccini G, Manenti A, Pantano E, Kabanova A, Troisi M, Vacca F, Cardamone D, De Santi C, Torres JL, Ozorowski G, Benincasa L, Jang H, Di Genova C, Depau L, Brunetti J, Agrati C, Capobianchi MR, Castilleti C, Emiliozzi A, Fabianni M, Montagnani F, Bracci L, Sautto G, Ross T, Mantomoli E, Temperton N, Ward AB, Sala C, Ippolito G, Rappuoli R
To Be Published
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, two RBDs bound
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7kmk
Q-score: 0.191
Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS
J Mol Biol (2021) 433 pp. 167177-167177 [ Pubmed: 34329642 DOI: doi:10.1016/j.jmb.2021.167177 ]
- Sars-cov-2 spike protein in complex with fab 15033-7 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab 15033-7 light chain (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Fab 15033-7 heavy chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, three RBDs bound
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7kml
Q-score: 0.23
Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS
J Mol Biol (2021) 433 pp. 167177-167177 [ Pubmed: 34329642 DOI: doi:10.1016/j.jmb.2021.167177 ]
- Sars-cov-2 spike protein in complex with fab 15033-7 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Fab 15033-7 light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Fab 15033-7 heavy chain (23 kDa, Protein from Homo sapiens)
SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-"up", asymmetric
Resolution: 6.4 Å
EM Method: Single-particle
Fitted PDBs: 7kxj
Q-score: 0.113
Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS
J Mol Biol (2021) 433 pp. 167177-167177 [ Pubmed: 34329642 DOI: doi:10.1016/j.jmb.2021.167177 ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Fab 15033-7 light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike protein in complex with fab 15033-7 (Complex from Homo sapiens)
- Fab 15033-7 heavy chain (23 kDa, Protein from Homo sapiens)
SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7kxk
Q-score: 0.118
Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS
J Mol Biol (2021) 433 pp. 167177-167177 [ Pubmed: 34329642 DOI: doi:10.1016/j.jmb.2021.167177 ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Fab 15033-7 light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike protein in complex with fab 15033-7 (Complex from Homo sapiens)
- Fab 15033-7 heavy chain (23 kDa, Protein from Homo sapiens)