Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8pnb
Q-score: 0.324
Gil-Cantero D, Mata CP, Valiente L, Rodriguez-Huete A, Valbuena A, Twarock R, Stockley PG, Mateu MG, Caston JR
Commun Biol (2024) 7 pp. 1501-1501 [ DOI: doi:10.1038/s42003-024-07213-2 Pubmed: 39537894 ]
- Rhinovirus b14 (Virus from rhinovirus B14)
- Genome polyprotein (26 kDa, Protein from rhinovirus B14)
- Capsid protein vp1 (26 kDa, Protein from rhinovirus B14)
- Capsid protein vp2 (27 kDa, Protein from rhinovirus B14)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8pnf
Q-score: 0.601
Gil-Cantero D, Mata CP, Valiente L, Rodriguez-Huete A, Valbuena A, Twarock R, Stockley PG, Mateu MG, Caston JR
Commun Biol (2024) 7 pp. 1501-1501 [ DOI: doi:10.1038/s42003-024-07213-2 Pubmed: 39537894 ]
- Capsid protein vp2 (27 kDa, Protein from rhinovirus B14)
- Capsid protein vp3 (26 kDa, Protein from rhinovirus B14)
- Capsid protein vp1 (31 kDa, Protein from rhinovirus B14)
- Rhinovirus b14 (Virus from rhinovirus B14)
- Rna (5'-r(p*ap*up*up*up*up*up*up*up*up*up*up*up*up*u)-3') (4 kDa, RNA from rhinovirus B14)
- Capsid protein vp4 (5 kDa, Protein from rhinovirus B14)
VP2-only capsid of wt MVM prototype strain p
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 7z5d
Q-score: 0.558
Luque D, Ortega-Esteban A, Valbuena A, Luis Vilas J, Rodriguez-Huete A, Mateu MG, Caston JR
J Mol Biol (2023) 435 pp. 168024-168024 [ DOI: doi:10.1016/j.jmb.2023.168024 Pubmed: 36828271 ]
- Minute virus of mice (Virus from Minute virus of mice)
- Capsid protein vp1 (64 kDa, Protein from Minute virus of mice)
VP2-only capsid of MVM D263A mutant
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 7z5e
Q-score: 0.566
Luque D, Ortega-Esteban A, Valbuena A, Luis Vilas J, Rodriguez-Huete A, Mateu MG, Caston JR
J Mol Biol (2023) 435 pp. 168024-168024 [ DOI: doi:10.1016/j.jmb.2023.168024 Pubmed: 36828271 ]
- Minute virus of mice (Virus from Minute virus of mice)
- Capsid protein vp1 (64 kDa, Protein from Minute virus of mice)
VP2-only capsid of wt MVM prototype strain p
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 7z5f
Q-score: 0.579
Luque D, Ortega-Esteban A, Valbuena A, Luis Vilas J, Rodriguez-Huete A, Mateu MG, Caston JR
J Mol Biol (2023) 435 pp. 168024-168024 [ DOI: doi:10.1016/j.jmb.2023.168024 Pubmed: 36828271 ]
- Minute virus of mice (Virus from Minute virus of mice)
- Capsid protein vp1 (64 kDa, Protein from Minute virus of mice)
Brevibacterium linens encapsulin structure
Resolution: 2.28 Å
EM Method: Single-particle
Fitted PDBs: 7bcv
Q-score: 0.67
Allende-Ballestero C, Luque D, Klem R, Cornelissen JJLM, Caston JR
To Be Published
- Linocin-m18 (28 kDa, Protein from Brevibacterium linens)
- Encapsulin (1 MDa, Complex from Brevibacterium linens)
Brevibacterium linens encapsulin-associated Dye-decolorizing peroxidase
Allende-Ballestero C, Luque D, Klem R, Cornelissen JJLM, Caston JR
To Be Published
- Dye-decolorizing peroxidase (240 kDa, Complex from Brevibacterium linens)
- Dye-decolorizing peroxidase (Protein from Brevibacterium linens)
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7o7l
Q-score: 0.142
Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR
PNAS (2022) 119 pp. e2200102119-e2200102119 [ DOI: doi:10.1073/pnas.2200102119 Pubmed: 35500114 ]
- Alpha-2-macroglobulin (163 kDa, Protein from Homo sapiens)
- Human alpha-2-macroglobulin native i (700 kDa, Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 7o7m
Q-score: 0.097
Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR
PNAS (2022) 119 pp. e2200102119-e2200102119 [ DOI: doi:10.1073/pnas.2200102119 Pubmed: 35500114 ]
- Alpha-2-macroglobulin (163 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human alpha-2-macroglobulin native ii (700 kDa, Complex from Homo sapiens)
(h-alpha2M)4 semiactivated I state
Resolution: 7.3 Å
EM Method: Single-particle
Fitted PDBs: 7o7n
Q-score: 0.11
Luque D, Goulas T, Mata CP, Mendes SR, Gomis-Ruth FX, Caston JR
PNAS (2022) 119 pp. e2200102119-e2200102119 [ DOI: doi:10.1073/pnas.2200102119 Pubmed: 35500114 ]
- Alpha-2-macroglobulin (163 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human alpha-2-macroglobulin semiactivated i state (700 kDa, Complex from Homo sapiens)