TniQ-capped TnsC-ATP-dsDNA complex
Schmitz M, Querques I, Oberli S, Chanez C, Jinek M
Cell (2022) 185 pp. 4999-5010.e17 [ Pubmed: 36435179 DOI: 10.1016/j.cell.2022.11.009 ]
Image sets:
Vibrio cholerae DdmD-DdmE holo complex
Loeff L, Adams DW, Chanez C, Stutzmann S, Righi L, Blokesch M, Jinek M
Science (2024) 385 pp. 188-194 [ Pubmed: 38870273 DOI: 10.1126/science.adq0534 ]
Image sets:
Vibrio cholerae DdmD apo complex
Loeff L, Adams DW, Chanez C, Stutzmann S, Righi L, Blokesch M, Jinek M
Science (2024) 385 pp. 188-194 [ Pubmed: 38870273 DOI: 10.1126/science.adq0534 ]
Image sets:
Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex
Schmitz M, Querques I, Oberli S, Chanez C, Jinek M
Cell (2022) 185 pp. 4999-5010.e17 [ Pubmed: 36435179 DOI: 10.1016/j.cell.2022.11.009 ]
Image sets:
ShCas12k in complex with a sgRNA and a dsDNA target
Querques I, Schmitz M, Oberli S, Chanez C, Jinek M
Nature (2021) 599 pp. 497-502 [ DOI: 10.1038/s41586-021-04030-z Pubmed: 34759315 ]
Image sets:
Scytonema hofmannii TnsC bound to AMPPNP and DNA
Querques I, Schmitz M, Oberli S, Chanez C, Jinek M
Nature (2021) 599 pp. 497-502 [ DOI: 10.1038/s41586-021-04030-z Pubmed: 34759315 ]
Image sets:
Vibrio cholerae DdmD-DdmE holo complex
Loeff L, Adams DW, Chanez C, Stutzmann S, Righi L, Blokesch M, Jinek M
Science (2024) 385 pp. 188-194 [ Pubmed: 38870273 DOI: doi:10.1126/science.adq0534 ]
- Ddmd-ddme holocomplex (Complex from Vibrio cholerae)
- Magnesium ion (24 Da, Ligand)
- Non-target dna strand (20 kDa, DNA from synthetic construct)
- Vibrio cholerae ddme (79 kDa, Protein from Vibrio cholerae)
- 14 nucleotide dna guide with terminal 5' phosphate (4 kDa, DNA from synthetic construct)
- Helicase/uvrb n-terminal domain-containing protein (136 kDa, Protein from Vibrio cholerae)
- Target dna strand (20 kDa, DNA from synthetic construct)
Vibrio cholerae DdmD apo complex
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 9ezx
Q-score: 0.506
Loeff L, Adams DW, Chanez C, Stutzmann S, Righi L, Blokesch M, Jinek M
Science (2024) 385 pp. 188-194 [ Pubmed: 38870273 DOI: doi:10.1126/science.adq0534 ]
- Dimeric complex of the ddmd protein (266 kDa, Complex from Vibrio cholerae)
- Helicase/uvrb n-terminal domain-containing protein (136 kDa, Protein from Vibrio cholerae)
TniQ-capped Tns-ATP-dsDNA complex
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8bd4
Q-score: 0.26
Schmitz M, Querques I, Oberli S, Chanez C, Jinek M
Cell (2022) 185 pp. 4999- [ DOI: doi:10.1016/j.cell.2022.11.009 Pubmed: 36435179 ]
- Complex of tnsc and tniq transposon proteins bound to atp and dsdna (Complex from Scytonema hofmannii)
- Magnesium ion (24 Da, Ligand)
- Dna (5'-d(p*gp*ap*tp*cp*gp*ap*tp*cp*gp*ap*tp*cp*gp*ap*tp*c)-3') (4 kDa, DNA from synthetic construct)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Tniq (homology model) (19 kDa, Protein from Scytonema hofmannii)
- Tnsc (31 kDa, Protein from Scytonema hofmannii)
Cas12k-sgRNA-dsDNA-S15-TniQ-TnsC transposon recruitment complex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8bd5
Q-score: 0.39
Schmitz M, Querques I, Oberli S, Chanez C, Jinek M
Cell (2022) 185 pp. 4999- [ DOI: doi:10.1016/j.cell.2022.11.009 Pubmed: 36435179 ]
- Sgrna (82 kDa, RNA from Scytonema hofmannii)
- Magnesium ion (24 Da, Ligand)
- Dna target strand (14 kDa, DNA from synthetic construct)
- Target dna bound cas12k-sgrna-s15-tniq-tnsc transposon recruitment complex (Complex from Scytonema hofmannii)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Shcas12k (79 kDa, Protein from Scytonema hofmannii)
- Zinc ion (65 Da, Ligand)
- Tniq (homology model) (19 kDa, Protein from Scytonema hofmannii)
- Dna non-target strand (15 kDa, DNA from synthetic construct)
- Tnsc (31 kDa, Protein from Scytonema hofmannii)