Head-Middle module of Mediator
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6xp5
Q-score: 0.337
Zhang H, Chen DH, Mattoo RUH, Bushnell DA, Wang Y, Yuan C, Wang L, Wang C, Davis RE, Nie Y, Kornberg RD
Mol Cell (2021) 81 pp. 1781-1788.e4 [ DOI: doi:10.1016/j.molcel.2021.01.022 Pubmed: 33571424 ]
- Mediator of rna polymerase ii transcription subunit 4 (37 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 11 (25 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Heat (17 kDa, Protein from Chaetomium thermophilum)
- Mediator of rna polymerase ii transcription subunit 9 (18 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 7 (27 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 8 (32 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 1 (81 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Head-middle module of mediator (Complex from Chaetomium thermophilum)
- Mediator of rna polymerase ii transcription subunit 31 (14 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 21 (15 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 17 (69 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 18 (38 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 14 (133 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Med22 (18 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 6 (36 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Unknown peptide (1 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 7jmn
Q-score: 0.466
Zhang H, Chen DH, Mattoo RUH, Bushnell DA, Wang Y, Yuan C, Wang L, Wang C, Davis RE, Nie Y, Kornberg RD
Mol Cell (2021) 81 pp. 1781-1788.e4 [ DOI: doi:10.1016/j.molcel.2021.01.022 Pubmed: 33571424 ]
- Unknown peptide (4 kDa, Protein from Chaetomium thermophilum var. thermophilum DSM 1495)
- Mediator of rna polymerase ii transcription subunit 5 (118 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Mediator of rna polymerase ii transcription subunit 16 (123 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- T module complex (Complex from Chaetomium thermophilum var. thermophilum DSM 1495)
- Mediator of rna polymerase ii transcription subunit 14 (133 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
- Med15 (175 kDa, Protein from Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719))
Zhang H, Chen DH, Mattoo RUH, Bushnell DA, Wang Y, Yuan C, Wang L, Wang C, Davis RE, Nie Y, Kornberg RD
Mol Cell (2021) 81 pp. 1781-1788.e4 [ DOI: doi:10.1016/j.molcel.2021.01.022 Pubmed: 33571424 ]
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion
Oliver SL, Xing Y, Chen DH, Roh SH, Pintilie GD, Bushnell DA, Sommer MH, Yang E, Carfi A, Chiu W, Arvin AM
PLoS Pathog (2021) 17 pp. e1008961-e1008961 [ DOI: doi:10.1371/journal.ppat.1008961 Pubmed: 33411789 ]
- Varicella-zoster virus glycoprotein b (Complex from Human alphaherpesvirus 3)
- Monoclonal antibody 93k bound to varicella-zoster virus glycoprotein b (Macromolecule from Human alphaherpesvirus 3)
- Monoclonal antibody 93k bound to varicella-zoster virus glycoprotein b (Complex)
- Monoclonal antibody 93k (Complex from unidentified)
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion
Oliver SL, Xing Y, Chen DH, Roh SH, Pintilie GD, Bushnell DA, Sommer MH, Yang E, Carfi A, Chiu W, Arvin AM
PLoS Pathog (2021) 17 pp. e1008961-e1008961 [ DOI: doi:10.1371/journal.ppat.1008961 Pubmed: 33411789 ]
- Varicella-zoster virus glycoprotein b (Complex from Human alphaherpesvirus 3)
- Monoclonal antibody sg2 (Complex from unidentified)
- Monoclonal antibody sg2 bound to varicella-zoster virus glycoprotein b (Protein from Human alphaherpesvirus 3)
- Monoclonal antibody sg2 bound to varicella-zoster virus glycoprotein b (Complex)
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion.
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7k1s
Q-score: 0.394
Oliver SL, Xing Y, Chen DH, Roh SH, Pintilie GD, Bushnell DA, Sommer MH, Yang E, Carfi A, Chiu W, Arvin AM
PLoS Pathog (2021) 17 pp. e1008961-e1008961 [ DOI: doi:10.1371/journal.ppat.1008961 Pubmed: 33411789 ]
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6vn1
Q-score: 0.582
Oliver SL, Xing Y, Chen DH, Roh SH, Pintilie GD, Bushnell DA, Sommer MH, Yang E, Carfi A, Chiu W, Arvin AM
Nat Commun (2020) 11 pp. 4141-4141 [ DOI: doi:10.1038/s41467-020-17911-0 Pubmed: 32811830 ]
- Varicella zoster virus glycoprotein b in complex with fab fragments derived from human monoclonal antibody 93k (750 kDa, Complex)
- Human monoclonal antibody 93k fab (Complex from Homo sapiens)
- Varicella zoster virus glycoprotein b (Complex from Human herpesvirus 3)
- Envelope glycoprotein b (105 kDa, Protein from Human alphaherpesvirus 3)
- Human monoclonal antibody 93k variable heavy chain (13 kDa, Protein from Homo sapiens)
- Human monoclonal antibody 93k variable light chain (11 kDa, Protein from Homo sapiens)