D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in intact conformation
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 8e92
Q-score: 0.397
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in splayed conformation
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 8e93
Q-score: 0.443
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
PYD-106-bound Human GluN1a-GluN2C NMDA receptor in intact conformation
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8e94
Q-score: 0.47
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ Pubmed: 36309015 DOI: doi:10.1016/j.molcel.2022.10.008 ]
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Methyl 4-[(2~{r})-3-ethanoyl-1-[2-(2-methyl-1~{h}-indol-3-yl)ethyl]-4-oxidanyl-5-oxidanylidene-2~{h}-pyrrol-2-yl]benzoate (432 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
PYD-106-bound Human GluN1a-GluN2C NMDA receptor in splayed conformation
Resolution: 4.19 Å
EM Method: Single-particle
Fitted PDBs: 8e97
Q-score: 0.336
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ Pubmed: 36309015 DOI: doi:10.1016/j.molcel.2022.10.008 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
Human GluN1a-GluN2A-GluN2C triheteromeric NMDA receptor in complex with Nb-4
Resolution: 4.24 Å
EM Method: Single-particle
Fitted PDBs: 8e99
Q-score: 0.363
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Nanobody 4 (16 kDa, Protein from Lama glama)
- Glutamate receptor ionotropic, nmda 2a (97 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7saa
Q-score: 0.505
Chou TH, Epstein M, Michalski K, Fine E, Biggin PC, Furukawa H
Nat Struct Mol Biol (2022) 29 pp. 507-518 [ DOI: doi:10.1038/s41594-022-00772-0 Pubmed: 35637422 ]
- Hetero-tetrameric glun1a-glun2b nmda receptors (Complex from Rattus norvegicus)
- Glycine (75 Da, Ligand)
- Glutamate receptor ionotropic, nmda 2b (98 kDa, Protein from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Rattus norvegicus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamic acid (147 Da, Ligand)
S-(+)-ketamine bound GluN1a-GluN2B NMDA receptors at 3.69 Angstrom resolution
Resolution: 3.69 Å
EM Method: Single-particle
Fitted PDBs: 7sac
Q-score: 0.419
Chou TH, Epstein M, Michalski K, Fine E, Biggin PC, Furukawa H
Nat Struct Mol Biol (2022) 29 pp. 507-518 [ DOI: doi:10.1038/s41594-022-00772-0 Pubmed: 35637422 ]
- Hetero-tetrameric glun1a-glun2b nmda receptors (Complex from Rattus norvegicus)
- Glycine (75 Da, Ligand)
- Glutamate receptor ionotropic, nmda 2b (98 kDa, Protein from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Rattus norvegicus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamic acid (147 Da, Ligand)
- (2~{s})-2-(2-chlorophenyl)-2-(methylamino)cyclohexan-1-one (237 Da, Ligand)
Memantine-bound GluN1a-GluN2B NMDA receptors
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 7sad
Q-score: 0.376
Chou TH, Epstein M, Michalski K, Fine E, Biggin PC, Furukawa H
Nat Struct Mol Biol (2022) 29 pp. 507-518 [ DOI: doi:10.1038/s41594-022-00772-0 Pubmed: 35637422 ]
- Hetero-tetrameric glun1a-glun2b nmda receptors (Complex from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 2b (98 kDa, Protein from Rattus norvegicus)
- Memantine (179 Da, Ligand)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Rattus norvegicus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
GluN1b-GluN2B NMDA receptor in non-active 2 conformation at 4 angstrom resolution
Resolution: 3.99 Å
EM Method: Single-particle
Fitted PDBs: 6whr
Q-score: 0.411
Chou TH, Tajima N, Romero-Hernandez A, Furukawa H
Cell (2020) 182 pp. 357-371.e13 [ Pubmed: 32610085 DOI: doi:10.1016/j.cell.2020.05.052 ]
- Glutamate receptor ionotropic, nmda 2b (98 kDa, Protein from Rattus norvegicus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Nmda receptor glun1b/2b functional ion channel complex (Complex from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 1 (108 kDa, Protein from Rattus norvegicus)
GluN1b-GluN2B NMDA receptor in non-active 1 conformation at 3.95 angstrom resolution
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6whs
Q-score: 0.421
Chou TH, Tajima N, Romero-Hernandez A, Furukawa H
Cell (2020) 182 pp. 357-371.e13 [ DOI: doi:10.1016/j.cell.2020.05.052 Pubmed: 32610085 ]
- Glutamate receptor ionotropic, nmda 1 (108 kDa, Protein from Rattus norvegicus)
- Nmda receptor glun1b/2b functional ion channel complex (Complex from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 2b (98 kDa, Protein from Rattus norvegicus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)