EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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primary_citation_author:"Concha N"

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EMDB [5]

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EMD-18418

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Human DNA methyltransferase 1

Release date: July 24, 2024
Resolution: 3.3 Å
EM Method: Single-particle

De I, Weidenhausen J, Concha N, Muller CW

PLoS One (2024) 19 pp. e0307850-e0307850 [ DOI: doi:10.1371/journal.pone.0307850 Pubmed: 39226277 ]

Sample:

Human dna methyltransferase 1 (Complex from Homo sapiens)

EMD-50795

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Human DNA methyltransferase 1 in non-productive complex with DNA

Release date: July 24, 2024
Resolution: 5.11 Å
EM Method: Single-particle

De I, Weidenhausen J, Concha N, Muller CW

PLoS One (2024) 19 pp. e0307850-e0307850 [ DOI: doi:10.1371/journal.pone.0307850 Pubmed: 39226277 ]

Sample:

Human dna methyltransferase 1 in non-productive complex with dna in presence of inhibitor gsk3852279b (Complex from Homo sapiens)

EMD-50801

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Human DNA methyltransferase 1 bound to H3Ub2-peptide

Release date: July 24, 2024
Resolution: 6.0 Å
EM Method: Single-particle

De I, Weidenhausen J, Concha N, Muller CW

PLoS One (2024) 19 pp. e0307850-e0307850 [ DOI: doi:10.1371/journal.pone.0307850 Pubmed: 39226277 ]

Sample:

Human dna methyltransferase 1 bound to h3ub2-peptide (Complex from Homo sapiens)

EMD-50802

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Human DNA methyltransferase 1 productive DNA complex in presence of H3Ub2-peptide

Release date: July 24, 2024
Resolution: 4.6 Å
EM Method: Single-particle

De I, Weidenhausen J, Concha N, Muller CW

PLoS One (2024) 19 pp. e0307850-e0307850 [ DOI: doi:10.1371/journal.pone.0307850 Pubmed: 39226277 ]

Sample:

Human dna methyltransferase 1 bound to 5fdna and in presence of h3ub2-peptide (Complex from Homo sapiens)

EMD-25581

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cryoEM reconstruction of the HIV gp140 in complex with the extracellular domains of CD4 and the adnectin domain of Combinectin. The gp140 and CD4 coordinates from entry 6EDU were rigid body fitted to the EM map along withe the crystal structure of CD4+adnectin

Release date: Jan. 12, 2022
Resolution: 8.7 Å
EM Method: Single-particle
Fitted PDBs: 7t0o
Q-score: 0.037

Wensel D, Williams S, Dixon DP, Ward P, McCormick P, Concha N, Stewart E, Hong X, Mazzucco C, Pal S, Ding B, Fellinger C, Krystal M

J Mol Biol (2021) 434 pp. 167395-167395 [ Pubmed: 34896364 DOI: doi:10.1016/j.jmb.2021.167395 ]

Sample:

Bg505 sosip.664 gp140 (2 kDa, Protein from HIV-1 06TG.HT008)
Bg505 sosip.664 gp140 (3 kDa, Protein from HIV-1 06TG.HT008)
Bg505 sosip.664 gp140 (3 kDa, Protein from HIV-1 06TG.HT008)
T-cell surface glycoprotein cd4 (41 kDa, Protein from Homo sapiens)
Adnectin (11 kDa, Protein from Homo sapiens)
Bg505 sosip.664 gp140 (72 kDa, Protein from HIV-1 06TG.HT008)
Ternary complex of the hiv-1 gp140 trimer in complex with the extracellular domains (domains 1-4) of cd4 and an adnectin domain of combinectin (Complex)

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EMDB [5]

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