Homotypic interacting B1 fab bound to Chondroitin Sulfate A
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8p2e
Q-score: 0.369
Vidal-Calvo EE, Martin-Salazar A, Choudhary S, Dagil R, Raghavan SSR, Duvnjak L, Nordmaj MA, Clausen TM, Skafte A, Oberkofler J, Wang K, Agerbaek MO, Loppke C, Jorgensen AM, Ropac D, Mujollari J, Willis S, Garcias Lopez A, Miller RL, Karlsson RTG, Goerdeler F, Chen YH, Colaco AR, Wang Y, Lavstsen T, Martowicz A, Nelepcu I, Marzban M, Oo HZ, Orum-Madsen MS, Wang Y, Nielsen MA, Clausen H, Wierer M, Wolf D, Gogenur I, Theander TG, Al-Nakouzi N, Gustavsson T, Daugaard M, Salanti A
Nat Commun (2024) 15 pp. 7553-7553 [ DOI: doi:10.1038/s41467-024-51781-0 Pubmed: 39215044 ]
- B1 fabs bound to chondroitin sulphate a (50 MDa, Complex from Homo sapiens)
- B1 fab light (23 kDa, Protein from Homo sapiens)
- B1 fab heavy (26 kDa, Protein from Homo sapiens)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7z12
Q-score: 0.362
Raghavan SSR, Dagil R, Lopez-Perez M, Conrad J, Bassi MR, Quintana MDP, Choudhary S, Gustavsson T, Wang Y, Gourdon P, Ofori MF, Christensen SB, Minja DTR, Schmiegelow C, Nielsen MA, Barfod L, Hviid L, Salanti A, Lavstsen T, Wang K
PLoS Pathog (2022) 18 pp. e1010924-e1010924 [ Pubmed: 36383559 DOI: doi:10.1371/journal.ppat.1010924 ]
- Pam1.4, heavy chain (51 kDa, Protein from Homo sapiens)
- Var2csa complex with pam1.4 (350 kDa, Complex from Plasmodium falciparum)
- Pam1.4, light chain (25 kDa, Protein from Homo sapiens)
- Var2csa (235 kDa, Protein from Plasmodium falciparum)
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 7z1h
Q-score: 0.315
Raghavan SSR, Dagil R, Lopez-Perez M, Conrad J, Bassi MR, Quintana MDP, Choudhary S, Gustavsson T, Wang Y, Gourdon P, Ofori MF, Christensen SB, Minja DTR, Schmiegelow C, Nielsen MA, Barfod L, Hviid L, Salanti A, Lavstsen T, Wang K
PLoS Pathog (2022) 18 pp. e1010924-e1010924 [ Pubmed: 36383559 DOI: doi:10.1371/journal.ppat.1010924 ]
- Var2csa apo (235 kDa, Protein from Plasmodium falciparum)
- Var2csa apo (310 kDa, Complex from Plasmodium falciparum)
VAR2CSA full ectodomain in present of plCS, DBL1-DBL4
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7b54
Q-score: 0.395
Wang K, Dagil R, Lavstsen T, Misra SK, Spliid CB, Wang Y, Gustavsson T, Sandoval DR, Vidal-Calvo EE, Choudhary S, Agerbaek MO, Lindorff-Larsen K, Nielsen MA, Theander TG, Sharp JS, Clausen TM, Gourdon P, Salanti A
Nat Commun (2021) 12 pp. 2956-2956 [ DOI: doi:10.1038/s41467-021-23254-1 Pubmed: 34011972 ]
Cryo-EM structure of VAR2CSA FCR3 domain DBL5/6
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7nnh
Q-score: 0.238
Wang K, Dagil R, Lavstsen T, Misra SK, Spliid CB, Wang Y, Gustavsson T, Sandoval DR, Vidal-Calvo EE, Choudhary S, Agerbaek MO, Lindorff-Larsen K, Nielsen MA, Theander TG, Sharp JS, Clausen TM, Gourdon P, Salanti A
Nat Commun (2021) 12 pp. 2956-2956 [ DOI: doi:10.1038/s41467-021-23254-1 Pubmed: 34011972 ]
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7b52
Q-score: 0.306
Wang K, Dagil R, Lavstsen T, Misra SK, Spliid CB, Wang Y, Gustavsson T, Sandoval DR, Vidal-Calvo EE, Choudhary S, Agerbaek MO, Lindorff-Larsen K, Nielsen MA, Theander TG, Sharp JS, Clausen TM, Gourdon P, Salanti A
Nat Commun (2021) 12 pp. 2956-2956 [ DOI: doi:10.1038/s41467-021-23254-1 Pubmed: 34011972 ]
- Var2csa full ectodomain (Complex from Plasmodium falciparum)
- Erythrocyte membrane protein 1 (307 kDa, Protein from Plasmodium falciparum)