Cryo-EM structure of human tankyrase 2 SAM-PARP filament (G1032W mutant)
Resolution: 2.98 Å
EM Method: Helical reconstruction
Fitted PDBs: 8aly
Q-score: 0.586
Pillay N, Mariotti L, Zaleska M, Inian O, Jessop M, Hibbs S, Desfosses A, Hopkins PCR, Templeton CM, Beuron F, Morris EP, Guettler S
Nature (2022) 612 pp. 162-169 [ Pubmed: 36418402 DOI: doi:10.1038/s41586-022-05449-8 ]
- Poly [adp-ribose] polymerase tankyrase-2 (34 kDa, Protein from Homo sapiens)
- Tnks2 sam-parp (867-1162) filament (34 MDa, Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Providencia stuartii Arginine decarboxylase (Adc), decamer structure
Resolution: 2.45 Å
EM Method: Single-particle
Fitted PDBs: 7p9b
Q-score: 0.649
Jessop M, Huard K, Desfosses A, Tetreau G, Carriel D, Bacia-Verloop M, Mas C, Mas P, Fraudeau A, Colletier JP, Gutsche I
Commun Biol (2022) 5 pp. 317-317 [ Pubmed: 35383285 DOI: doi:10.1038/s42003-022-03276-1 ]
- Decameric form of p. stuartii adc (858 kDa, Complex from Providencia stuartii)
- Biodegradative arginine decarboxylase (86 kDa, Protein from Providencia stuartii)
Providencia stuartii Arginine decarboxylase (Adc), stack structure
Resolution: 2.15 Å
EM Method: Single-particle
Fitted PDBs: 7pk6
Q-score: 0.63
Jessop M, Huard K, Desfosses A, Tetreau G, Carriel D, Bacia-Verloop M, Mas C, Mas P, Fraudeau A, Colletier JP, Gutsche I
Commun Biol (2022) 5 pp. 317-317 [ Pubmed: 35383285 DOI: doi:10.1038/s42003-022-03276-1 ]
- Stacked decamer form of p. stuartii adc (858 kDa, Complex from Providencia stuartii)
- Biodegradative arginine decarboxylase (86 kDa, Protein from Providencia stuartii)
Inducible lysine decarboxylase LdcI decamer, pH 7.0
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 6yn5
Q-score: 0.631
Jessop M, Liesche C, Felix J, Desfosses A, Baulard M, Adam V, Fraudeau A, Huard K, Effantin G, Kleman JP, Bacia-Verloop M, Bourgeois D, Gutsche I
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2014383118 Pubmed: 33372137 ]
Inducible lysine decarboxylase LdcI stacks, pH 5.7
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 6yn6
Q-score: 0.485
Jessop M, Liesche C, Felix J, Desfosses A, Baulard M, Adam V, Fraudeau A, Huard K, Effantin G, Kleman JP, Bacia-Verloop M, Bourgeois D, Gutsche I
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2014383118 Pubmed: 33372137 ]
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in extended state, 3-fold symmetrised
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6rbk
Q-score: 0.529
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
Cryo-EM structure of the anti-feeding prophage (AFP) helical sheath-tube complex in extended state
Resolution: 2.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 6rbn
Q-score: 0.586
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
- Afp3 (48 kDa, Protein from Serratia entomophila)
- Afp1 (16 kDa, Protein from Serratia entomophila)
- Cryo-em structure of the anti-feeding prophage (afp) helical sheath-tube complex in extended state (Complex from Serratia entomophila)
- Afp2 (38 kDa, Protein from Serratia entomophila)
Cryo-EM structure of the anti-feeding prophage (AFP) sheath-tube in contracted state, C6 symmetrized
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
Cryo-EM structure of the anti-feeding prophage (AFP) needle from signal-subtracted particles
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
Cryo-EM structure of the anti-feeding prophage (AFP) baseplate in contracted state
Resolution: 5.4 Å
EM Method: Single-particle
Fitted PDBs: 6rgl
Q-score: 0.275
Desfosses A, Venugopal H, Joshi T, Felix J, Jessop M, Jeong H, Hyun J, Heymann JB, Hurst MRH, Gutsche I, Mitra AK
Nat Microbiol (2019) 4 pp. 1885-1894 [ Pubmed: 31384001 DOI: doi:10.1038/s41564-019-0530-6 ]
- Afp2 (38 kDa, Protein from Serratia entomophila)
- Afp3 (48 kDa, Protein from Serratia entomophila)
- Afp4 (45 kDa, Protein from Serratia entomophila)
- Cryo-em structure of the anti-feeding prophage (afp) baseplate in contracted state (Complex from Serratia entomophila)