E. coli BAM complex bound to SurA with Darobactin
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 [ DOI: 10.1038/s41467-024-51358-x Pubmed: 39218969 ]
Image sets:
E. coli BAM complex bound to SurA_OmpX (arrival complex)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 [ DOI: 10.1038/s41467-024-51358-x Pubmed: 39218969 ]
Image sets:
E. coli BAM complex bound to SurA_OmpX with beta-1 crosslink (handover complex)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 [ DOI: 10.1038/s41467-024-51358-x Pubmed: 39218969 ]
Image sets:
E. coli BAM complex bound to SurA_EspP (release complexes)
Fenn KL, Horne JE, Crossley JA, Böhringer N, Horne RJ, Schäberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 [ DOI: 10.1038/s41467-024-51358-x Pubmed: 39218969 ]
Image sets:
Release Complex: BAM bound EspP and Extended SurA
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 8qpu
Q-score: 0.338
Fenn KL, Horne JE, Crossley JA, Bohringer N, Horne RJ, Schaberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 pp. 7612-7612 [ Pubmed: 39218969 DOI: doi:10.1038/s41467-024-51358-x ]
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Chaperone sura (49 kDa, Protein from Escherichia coli)
- Serine protease espp (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
- Release complex: bam bound espp and compact sura (290 kDa, Complex from Escherichia coli)
Release Complex: BAM bound EspP and Compact SurA
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8q0g
Q-score: 0.379
Fenn KL, Horne JE, Crossley JA, Bohringer N, Horne RJ, Schaberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 pp. 7612-7612 [ Pubmed: 39218969 DOI: doi:10.1038/s41467-024-51358-x ]
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Chaperone sura (49 kDa, Protein from Escherichia coli)
- Serine protease espp (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
- Release complex: bam bound espp and compact sura (290 kDa, Complex from Escherichia coli)
Wait Complex: Lateral open BAM bound Compact SurA
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 8pz1
Q-score: 0.449
Fenn KL, Horne JE, Crossley JA, Bohringer N, Horne RJ, Schaberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 pp. 7612-7612 [ Pubmed: 39218969 DOI: doi:10.1038/s41467-024-51358-x ]
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Wait complex: lateral open bam bound compact sura (250 kDa, Complex from Escherichia coli)
- Chaperone sura (49 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
Wait Complex: Lateral open BAM bound Extended SurA
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8pz2
Q-score: 0.46
Fenn KL, Horne JE, Crossley JA, Bohringer N, Horne RJ, Schaberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 pp. 7612-7612 [ Pubmed: 39218969 DOI: doi:10.1038/s41467-024-51358-x ]
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Wait complex: lateral open bam bound extended sura (250 kDa, Complex from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Chaperone sura (49 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
Wait Complex: BAM bound Darobactin-B and Compact SurA
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8pzu
Q-score: 0.437
Fenn KL, Horne JE, Crossley JA, Bohringer N, Horne RJ, Schaberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 pp. 7612-7612 [ Pubmed: 39218969 DOI: doi:10.1038/s41467-024-51358-x ]
- Darobactin-b (1 kDa, Protein from Photorhabdus heterorhabditis)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Chaperone sura (49 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
- Wait complex: bam bound darobactin-b and compact sura (250 kDa, Complex from Escherichia coli)
Wait Complex: BAM bound Darobactin-B and Extended SurA
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8pzv
Q-score: 0.548
Fenn KL, Horne JE, Crossley JA, Bohringer N, Horne RJ, Schaberle TF, Calabrese AN, Radford SE, Ranson NA
Nat Commun (2024) 15 pp. 7612-7612 [ Pubmed: 39218969 DOI: doi:10.1038/s41467-024-51358-x ]
- Darobactin-b (1 kDa, Protein from Photorhabdus heterorhabditis)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- Wait complex: bam bound darobactin-b and extended sura (250 kDa, Complex from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Chaperone sura (49 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)