Dephosphorylated CFTR in 1:1 complex with PKA-C (site II)
Resolution: 9.0 Å
EM Method: Single-particle
Fitted PDBs: 9dw4
Q-score: 0.123
Fiedorczuk K, Iordanov I, Mihalyi C, Szollosi A, Csanady L, Chen J
PNAS (2024) 121 pp. e2409049121-e2409049121 [ DOI: doi:10.1073/pnas.2409049121 Pubmed: 39495916 ]
- Dephosphorylated cftr in 1:1 complex with pka-c (position ii) (210 kDa, Complex from Bos taurus)
- Camp-dependent protein kinase catalytic subunit alpha (40 kDa, Protein from Bos taurus)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Cystic fibrosis transmembrane conductance regulator (1 kDa, Protein from Homo sapiens)
Dephosphorylated CFTR in 1:1 complex with PKA-C (site I)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 9dw5
Q-score: 0.397
Fiedorczuk K, Iordanov I, Mihalyi C, Szollosi A, Csanady L, Chen J
PNAS (2024) 121 pp. e2409049121-e2409049121 [ DOI: doi:10.1073/pnas.2409049121 Pubmed: 39495916 ]
- Magnesium ion (24 Da, Ligand)
- Camp-dependent protein kinase catalytic subunit alpha (40 kDa, Protein from Bos taurus)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Dephosphorylated cftr in 1:1 complex with pka-c (position i) (210 kDa, Complex from Bos taurus)
Dephosphorylated CFTR in 1:2 complex with PKA-C
Resolution: 6.0 Å
EM Method: Single-particle
Fitted PDBs: 9dw7
Q-score: 0.27
Fiedorczuk K, Iordanov I, Mihalyi C, Szollosi A, Csanady L, Chen J
PNAS (2024) 121 pp. e2409049121-e2409049121 [ DOI: doi:10.1073/pnas.2409049121 Pubmed: 39495916 ]
- Cystic fibrosis transmembrane conductance regulator (1 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Dephosphorylated cftr in 1:2 complex with pka-c (210 kDa, Complex from Bos taurus)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Camp-dependent protein kinase catalytic subunit alpha (40 kDa, Protein from Bos taurus)
Dephosphorylated (E1371Q)CFTR in complex with PKA-C
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9dw8
Q-score: 0.492
Fiedorczuk K, Iordanov I, Mihalyi C, Szollosi A, Csanady L, Chen J
PNAS (2024) 121 pp. e2409049121-e2409049121 [ DOI: doi:10.1073/pnas.2409049121 Pubmed: 39495916 ]
- Magnesium ion (24 Da, Ligand)
- Dephosphorylated (e1371q)cftr in complex with pka-c (210 kDa, Complex from Bos taurus)
- Camp-dependent protein kinase catalytic subunit alpha (40 kDa, Protein from Bos taurus)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- N-(2-phenylethyl)adenosine 5'-(tetrahydrogen triphosphate) (611 Da, Ligand)
Phosphorylated (E1371Q)CFTR in complex with PKA-C
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 9dw9
Q-score: 0.595
Fiedorczuk K, Iordanov I, Mihalyi C, Szollosi A, Csanady L, Chen J
PNAS (2024) 121 pp. e2409049121-e2409049121 [ DOI: doi:10.1073/pnas.2409049121 Pubmed: 39495916 ]
- Magnesium ion (24 Da, Ligand)
- Camp-dependent protein kinase catalytic subunit alpha (40 kDa, Protein from Bos taurus)
- Water (18 Da, Ligand)
- Chloride ion (35 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Decane (142 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Undecane (156 Da, Ligand)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Phosphorylated (e1371q)cftr in complex with pka-c (210 kDa, Complex from Bos taurus)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8ubr
Q-score: 0.61
Young PG, Levring J, Fiedorczuk K, Blanchard SC, Chen J
PNAS (2024) 121 pp. e2316675121-e2316675121 [ Pubmed: 38422021 DOI: doi:10.1073/pnas.2316675121 ]
- Magnesium ion (24 Da, Ligand)
- 4-[(z)-{(3m)-4-oxo-2-sulfanylidene-3-[3-(trifluoromethyl)phenyl]-1,3-thiazolidin-5-ylidene}methyl]benzoic acid (409 Da, Ligand)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (760 Da, Ligand)
- Complex of cftr with the small molecule inhibitor cftrinh-172 (168 kDa, Complex from Homo sapiens)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8eig
Q-score: 0.506
Science (2022) 378 pp. 284-290 [ DOI: doi:10.1126/science.ade2216 Pubmed: 36264792 ]
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- The complex of phosphorylated human delta f508 cystic fibrosis transmembrane conductance regulator (cftr) with elexacaftor (vx-445) and atp/mg (Complex from Homo sapiens)
- (6p)-n-(1,3-dimethyl-1h-pyrazole-4-sulfonyl)-6-[3-(3,3,3-trifluoro-2,2-dimethylpropoxy)-1h-pyrazol-1-yl]-2-[(4s)-2,2,4-trimethylpyrrolidin-1-yl]pyridine-3-carboxamide (597 Da, Ligand)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8eio
Q-score: 0.579
Science (2022) 378 pp. 284-290 [ DOI: doi:10.1126/science.ade2216 Pubmed: 36264792 ]
- Dodecane (170 Da, Ligand)
- Lumacaftor (452 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- (6p)-n-(1,3-dimethyl-1h-pyrazole-4-sulfonyl)-6-[3-(3,3,3-trifluoro-2,2-dimethylpropoxy)-1h-pyrazol-1-yl]-2-[(4s)-2,2,4-trimethylpyrrolidin-1-yl]pyridine-3-carboxamide (597 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- The complex of phosphorylated human delta f508 cystic fibrosis transmembrane conductance regulator (cftr) with elexacaftor (vx-445), lumacaftor (vx-809) and atp/mg (168 kDa, Complex from Homo sapiens)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Cystic fibrosis transmembrane conductance regulator (1 kDa, Protein from Homo sapiens)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8eiq
Q-score: 0.583
Science (2022) 378 pp. 284-290 [ DOI: doi:10.1126/science.ade2216 Pubmed: 36264792 ]
- Dodecane (170 Da, Ligand)
- N-(2,4-di-tert-butyl-5-hydroxyphenyl)-4-oxo-1,4-dihydroquinoline-3-carboxamide (392 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- The complex of phosphorylated human delta f508 cystic fibrosis transmembrane conductance regulator (cftr) with trikafta [elexacaftor (vx-445), tezacaftor (vx-661), ivacaftor (vx-770)] and atp/mg (168 kDa, Complex from Homo sapiens)
- Tezacaftor (520 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Cystic fibrosis transmembrane conductance regulator (168 kDa, Protein from Homo sapiens)
- Cystic fibrosis transmembrane conductance regulator (1 kDa, Protein from Homo sapiens)
- (6p)-n-(1,3-dimethyl-1h-pyrazole-4-sulfonyl)-6-[3-(3,3,3-trifluoro-2,2-dimethylpropoxy)-1h-pyrazol-1-yl]-2-[(4s)-2,2,4-trimethylpyrrolidin-1-yl]pyridine-3-carboxamide (597 Da, Ligand)
Dephosphorylated human delta F508 cystic fibrosis transmembrane conductance regulator (CFTR)
Resolution: 6.9 Å
EM Method: Single-particle
Fitted PDBs: 8ej1
Q-score: 0.334
Science (2022) 378 pp. 284-290 [ DOI: doi:10.1126/science.ade2216 Pubmed: 36264792 ]