Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 46C12 antibody Fab fragment
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7pnm
Q-score: 0.315
Wang C, Hesketh EL, Shamorkina TM, Li W, Franken PJ, Drabek D, van Haperen R, Townend S, van Kuppeveld FJM, Grosveld F, Ranson NA, Snijder J, de Groot RJ, Hurdiss DL, Bosch BJ
Nat Commun (2022) 13 pp. 2921-2921 [ DOI: doi:10.1038/s41467-022-30658-0 Pubmed: 35614127 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (146 kDa, Protein from Human coronavirus OC43)
- 46c12 antibody heavy chain (13 kDa, Protein from Homo sapiens)
- 46c12 antibody light chain (12 kDa, Protein from Homo sapiens)
- Human coronavirus oc43 spike glycoprotein ectodomain in complex with the 46c12 antibody fab fragment (583 kDa, Complex from Human coronavirus OC43)
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 43E6 antibody Fab fragment
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7pnq
Q-score: 0.166
Wang C, Hesketh EL, Shamorkina TM, Li W, Franken PJ, Drabek D, van Haperen R, Townend S, van Kuppeveld FJM, Grosveld F, Ranson NA, Snijder J, de Groot RJ, Hurdiss DL, Bosch BJ
Nat Commun (2022) 13 pp. 2921-2921 [ DOI: doi:10.1038/s41467-022-30658-0 Pubmed: 35614127 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human coronavirus oc43 spike glycoprotein ectodomain in complex with the 43e6 antibody fab fragment (583 kDa, Complex from Human coronavirus OC43)
- 43e6 antibody heavy chain (13 kDa, Protein from Homo sapiens)
- 43e6 antibody light chain (11 kDa, Protein from Homo sapiens)
- Spike glycoprotein (146 kDa, Protein from Human coronavirus OC43)
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 47C9 antibody Fab fragment
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7po5
Q-score: 0.306
Wang C, Hesketh EL, Shamorkina TM, Li W, Franken PJ, Drabek D, van Haperen R, Townend S, van Kuppeveld FJM, Grosveld F, Ranson NA, Snijder J, de Groot RJ, Hurdiss DL, Bosch BJ
Nat Commun (2022) 13 pp. 2921-2921 [ DOI: doi:10.1038/s41467-022-30658-0 Pubmed: 35614127 ]
- Human coronavirus oc43 spike glycoprotein ectodomain in complex with the 47c9 antibody fab fragment (583 kDa, Complex from Human coronavirus OC43)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (146 kDa, Protein from Human coronavirus OC43)
- 47c9 antibody heavy chain (13 kDa, Protein from Homo sapiens)
- 47c9 antibody light chain (11 kDa, Protein from Homo sapiens)
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 37F1 antibody Fab fragment
Wang C, Hesketh EL, Shamorkina TM, Li W, Franken PJ, Drabek D, van Haperen R, Townend S, van Kuppeveld FJM, Grosveld F, Ranson NA, Snijder J, de Groot RJ, Hurdiss DL, Bosch BJ
Nat Commun (2022) 13 pp. 2921-2921 [ DOI: doi:10.1038/s41467-022-30658-0 Pubmed: 35614127 ]
- Human coronavirus oc43 spike glycoprotein (Protein from Human coronavirus OC43)
- 37f1 antibody light chain (Protein from Homo sapiens)
- 37f1 antibody fab fragment (Complex)
- Human coronavirus oc43 spike glycoprotein ectodomain (Complex from Homo sapiens)
- Human coronavirus oc43 spike glycoprotein ectodomain in complex with the 37f1 antibody fab fragment (583 kDa, Complex from Human coronavirus OC43)
- 37f1 antibody heavy chain (Protein from Homo sapiens)
Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7r40
Q-score: 0.333
Du W, Hurdiss DL, Drabek D, Mykytyn AZ, Kaiser FK, Gonzalez-Hernandez M, Munoz-Santos D, Lamers MM, van Haperen R, Li W, Drulyte I, Wang C, Sola I, Armando F, Beythien G, Ciurkiewicz M, Baumgartner W, Guilfoyle K, Smits T, van der Lee J, van Kuppeveld FJM, van Amerongen G, Haagmans BL, Enjuanes L, Osterhaus ADME, Grosveld F, Bosch BJ
Sci Immunol (2022) 7 pp. eabp9312-eabp9312 [ DOI: doi:10.1126/sciimmunol.abp9312 Pubmed: 35471062 ]
- Sars-cov-2 spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 87g7 heavy chain variable region (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike glycoprotein in complex with the 87g7 antibody fab fragment (500 kDa, Complex)
- 87g7 light chain variable region (23 kDa, Protein from Homo sapiens)
- 87g7 antibody fab fragment (Complex from Homo sapiens)
Du W, Hurdiss DL, Drabek D, Mykytyn AZ, Kaiser FK, Gonzalez-Hernandez M, Munoz-Santos D, Lamers MM, van Haperen R, Li W, Drulyte I, Wang C, Sola I, Armando F, Beythien G, Ciurkiewicz M, Baumgartner W, Guilfoyle K, Smits T, van der Lee J, van Kuppeveld FJM, van Amerongen G, Haagmans BL, Enjuanes L, Osterhaus ADME, Grosveld F, Bosch BJ
Sci Immunol (2022) 7 pp. eabp9312-eabp9312 [ DOI: doi:10.1126/sciimmunol.abp9312 Pubmed: 35471062 ]
- 87g7 heavy chain variable domain (Protein from Homo sapiens)
- Sars-cov-2 spike protein (Protein from Severe acute respiratory syndrome coronavirus 2)
- Fab (Complex from Homo sapiens)
- Sars-cov-2 spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike glycoprotein in complex with the 87g7 antibody fab fragment (500 kDa, Complex)
- 87g7 light chain variable domain (Protein from Homo sapiens)