Cryo-EM structure of the ISFba1 TnpB-reRNA-dsDNA complex
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8iaz
Q-score: 0.548
Ren K, Zhou F, Zhang F, Yin M, Zhu Y, Wang S, Chen Y, Huang T, Wu Z, He J, Zhang A, Guo C, Huang Z
Cell Res (2024) 34 pp. 370-385 [ DOI: doi:10.1038/s41422-024-00952-1 Pubmed: 38575718 ]
- Rna (207-mer) (66 kDa, RNA from Firmicutes bacterium AM43-11BH)
- Transposase (44 kDa, Protein from Firmicutes bacterium AM43-11BH)
- Dna (5'-d(p*cp*cp*ap*tp*tp*ap*gp*gp*ap*gp*cp*tp*gp*ap*tp*g)-3') (4 kDa, DNA from Firmicutes bacterium AM43-11BH)
- The complex of protein with grna and target dna (Complex from Firmicutes bacterium AM43-11BH)
- Dna (5'-d(p*ap*cp*ap*tp*gp*gp*ap*cp*cp*ap*tp*cp*ap*gp*cp*tp*cp*cp*tp*ap*ap*tp*gp*g)-3') (7 kDa, DNA from Firmicutes bacterium AM43-11BH)
- Zinc ion (65 Da, Ligand)
Structure of a membrane protein M3
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 7xt6
Q-score: 0.413
Ma X, Zhu Y, Chen Y, Wang S, Yang D, Ma Z, Zhang A, Zhang F, Guo C, Huang Z
Science (2022) 377 pp. 880-885 [ DOI: doi:10.1126/science.abo3828 Pubmed: 35981028 ]
- B-cell antigen receptor complex-associated protein beta chain (16 kDa, Protein from Homo sapiens)
- B-cell antigen receptor complex-associated protein alpha chain (15 kDa, Protein from Homo sapiens)
- Protein m (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Isoform 2 of immunoglobulin heavy constant mu (40 kDa, Protein from Homo sapiens)
Cryo-EM structure of a membrane protein(WT)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7fjd
Q-score: 0.552
Chen Y, Zhu Y, Li X, Gao W, Zhen Z, Huang B, Ma Z, Zhang A, Song X, Ma Y, Guo C, Zhang F, Huang Z
Mol Cell (2022) 82 pp. 1278-1287.e5 [ Pubmed: 35271814 DOI: doi:10.1016/j.molcel.2022.02.017 ]
- T cell receptor alpha variable 12-3,possible j 11 gene segment,t cell receptor alpha chain constant (30 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- T-cell surface glycoprotein cd3 delta chain (18 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (18 kDa, Protein from Homo sapiens)
- Immune system (Complex from Homo sapiens)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- T cell receptor beta variable 6-5,m1-specific t cell receptor beta chain,t cell receptor beta constant 2 (34 kDa, Protein from Homo sapiens)
Cryo-EM structure of a membrane protein(LL)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7fje
Q-score: 0.559
Chen Y, Zhu Y, Li X, Gao W, Zhen Z, Huang B, Ma Z, Zhang A, Song X, Ma Y, Guo C, Zhang F, Huang Z
Mol Cell (2022) 82 pp. 1278-1287.e5 [ Pubmed: 35271814 DOI: doi:10.1016/j.molcel.2022.02.017 ]
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- T cell receptor beta variable 6-5,m1-specific t cell receptor beta chain,t cell receptor beta constant 2 (34 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 delta chain (18 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Immune system (Complex from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- T cell receptor alpha variable 12-3,possible j 11 gene segment,t cell receptor alpha chain constant (30 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (18 kDa, Protein from Homo sapiens)
Cryo-EM structure of a membrane protein(CS)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7fjf
Q-score: 0.482
Chen Y, Zhu Y, Li X, Gao W, Zhen Z, Huang B, Ma Z, Zhang A, Song X, Ma Y, Guo C, Zhang F, Huang Z
Mol Cell (2022) 82 pp. 1278-1287.e5 [ Pubmed: 35271814 DOI: doi:10.1016/j.molcel.2022.02.017 ]
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- Cholest-5-en-3-yl hydrogen sulfate (466 Da, Ligand)
- T-cell surface glycoprotein cd3 delta chain (18 kDa, Protein from Homo sapiens)
- T cell receptor beta variable 6-5,m1-specific t cell receptor beta chain,t cell receptor beta constant 2 (34 kDa, Protein from Homo sapiens)
- Immune system (Complex from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- T cell receptor alpha variable 12-3,possible j 11 gene segment,t cell receptor alpha chain constant (30 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (18 kDa, Protein from Homo sapiens)