Cryo-EM structure of POLRMT mutant.
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 7zc4
Q-score: 0.328
Zhu X, Xie X, Das H, Tan BG, Shi Y, Al-Behadili A, Peter B, Motori E, Valenzuela S, Posse V, Gustafsson CM, Hallberg BM, Falkenberg M
Cell (2022) 185 pp. 2309-2323.e24 [ Pubmed: 35662414 DOI: doi:10.1016/j.cell.2022.05.006 ]
- Polrmt (137 kDa, Cellular component from Homo sapiens)
- Dna-directed rna polymerase, mitochondrial (134 kDa, Protein from Homo sapiens)
Cryo-EM structure of POLRMT in free form.
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7pzr
Q-score: 0.385
Zhu X, Xie X, Das H, Tan BG, Shi Y, Al-Behadili A, Peter B, Motori E, Valenzuela S, Posse V, Gustafsson CM, Hallberg BM, Falkenberg M
Cell (2022) 185 pp. 2309-2323.e24 [ Pubmed: 35662414 DOI: doi:10.1016/j.cell.2022.05.006 ]
- Dna-directed rna polymerase, mitochondrial (137 kDa, Protein from Homo sapiens)
- Polrmt (137 kDa, Complex from Homo sapiens)
Zhu X, Xie X, Das H, Tan BG, Shi Y, Al-Behadili A, Peter B, Motori E, Valenzuela S, Posse V, Gustafsson CM, Hallberg BM, Falkenberg M
Cell (2022) 185 pp. 2309-2323.e24 [ Pubmed: 35662414 DOI: doi:10.1016/j.cell.2022.05.006 ]
Mitochondrial DNA dependent RNA polymerase homodimer.
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7pzp
Q-score: 0.323
Zhu X, Xie X, Das H, Tan BG, Shi Y, Al-Behadili A, Peter B, Motori E, Valenzuela S, Posse V, Gustafsson CM, Hallberg BM, Falkenberg M
Cell (2022) 185 pp. 2309- [ Pubmed: 35662414 DOI: doi:10.1016/j.cell.2022.05.006 ]
- Mitochondrial dna-directed rna polymerase dimer. (Complex from Homo sapiens)
- Dna-directed rna polymerase, mitochondrial (137 kDa, Protein from Homo sapiens)
- Polrmt (137 kDa, Complex)
Nanobody E bound to Spike-RBD in a localized reconstruction.
Resolution: 3.79 Å
EM Method: Single-particle
Fitted PDBs: 7b14
Q-score: 0.216
Koenig PA, Das H, Liu H, Kummerer BM, Gohr FN, Jenster LM, Schiffelers LDJ, Tesfamariam YM, Uchima M, Wuerth JD, Gatterdam K, Ruetalo N, Christensen MH, Fandrey CI, Normann S, Todtmann JMP, Pritzl S, Hanke L, Boos J, Yuan M, Zhu X, Schmid-Burgk JL, Kato H, Schindler M, Wilson IA, Geyer M, Ludwig KU, Hallberg BM, Wu NC, Schmidt FI
Science (2021) 371 [ Pubmed: 33436526 DOI: doi:10.1126/science.abe6230 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 glycoprotein in complex with a nanobody named v (510 kDa, Complex)
- Nanobody against sars-cov-2 (Complex from Camelus bactrianus)
- Nanobody against sars-cov-2 (14 kDa, Protein from Camelus bactrianus)
- Spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-spike bound to two neutralising nanobodies
Resolution: 2.62 Å
EM Method: Single-particle
Fitted PDBs: 7b18
Q-score: 0.397
Koenig PA, Das H, Liu H, Kummerer BM, Gohr FN, Jenster LM, Schiffelers LDJ, Tesfamariam YM, Uchima M, Wuerth JD, Gatterdam K, Ruetalo N, Christensen MH, Fandrey CI, Normann S, Todtmann JMP, Pritzl S, Hanke L, Boos J, Yuan M, Zhu X, Schmid-Burgk JL, Kato H, Schindler M, Wilson IA, Geyer M, Ludwig KU, Hallberg BM, Wu NC, Schmidt FI
Science (2021) 371 [ Pubmed: 33436526 DOI: doi:10.1126/science.abe6230 ]
- Sars-cov-2 glycoprotein in complex with two nanobodys named v (510 kDa, Complex)
- Nanobody against sars-cov-2 vhh e (Complex from Lama glama)
- Nanobody against spike glycoprotein vhh v (12 kDa, Protein from Vicugna pacos)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Nanobody against spike glycoprotein vhh v (Complex from Vicugna pacos)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Nanobody against sars-cov-2 vhh e (14 kDa, Protein from Lama glama)
- Spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-spike RBD bound to two neutralising nanobodies
Resolution: 4.01 Å
EM Method: Single-particle
Fitted PDBs: 7b17
Q-score: 0.272
Koenig PA, Das H, Liu H, Kummerer BM, Gohr FN, Jenster LM, Schiffelers LDJ, Tesfamariam YM, Uchima M, Wuerth JD, Gatterdam K, Ruetalo N, Christensen MH, Fandrey CI, Normann S, Todtmann JMP, Pritzl S, Hanke L, Boos J, Yuan M, Zhu X, Schmid-Burgk JL, Kato H, Schindler M, Wilson IA, Geyer M, Ludwig KU, Hallberg BM, Wu NC, Schmidt FI
Science (2021) 371 [ Pubmed: 33436526 DOI: doi:10.1126/science.abe6230 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Structure of sars-cov-2 spike rbd in complex with sars-cov-2 neutralizing biparatopic nanobody ve (300 kDa, Complex)
- Sars-cov-2 neutralizing biparatopic nanobody ve,nanobody e from lama glama,sars-cov-2 neutralizing biparatopic nanobody ve,nanobody e from lama glama (30 kDa, Protein from Lama glama)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Biparatopic nanobody ve (Complex from Vicugna pacos)
SARS-CoV-2 spike in complex with nanobodies E
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 7ksg
Q-score: 0.41
Koenig PA, Das H, Liu H, Kummerer BM, Gohr FN, Jenster LM, Schiffelers LDJ, Tesfamariam YM, Uchima M, Wuerth JD, Gatterdam K, Ruetalo N, Christensen MH, Fandrey CI, Normann S, Todtmann JMP, Pritzl S, Hanke L, Boos J, Yuan M, Zhu X, Schmid-Burgk JL, Kato H, Schindler M, Wilson IA, Geyer M, Ludwig KU, Hallberg BM, Wu NC, Schmidt FI
Science (2021) 371 [ Pubmed: 33436526 DOI: doi:10.1126/science.abe6230 ]
- Nanobody against sars-cov-2 glycoprotein (15 kDa, Protein from Lama glama)
- Sars-cov-2 spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Complex between sars-cov-2 and a neutralising nanobody e (510 kDa, Complex)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Nanobody e (Complex from Lama glama)