Yeast-expressed polio type 2 stabilized virus-like particles
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8zb6
Q-score: 0.489
Hong Q, Wang S, Wang X, Han W, Chen T, Liu Y, Cheng F, Qin S, Zhao S, Liu Q, Cong Y, Huang Z
Vaccines (Basel) (2024) 12 [ Pubmed: 39340107 DOI: doi:10.3390/vaccines12091077 ]
- Sphingosine (299 Da, Ligand)
- Vp1 (33 kDa, Protein from Poliovirus 2)
- Vp3 (26 kDa, Protein from Poliovirus 2)
- Vp2 (29 kDa, Protein from Poliovirus 2)
- Poliovirus 2 (Complex from Poliovirus 2)
Yeast-expressed polio type 2 expanded virus-like particles
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8zh6
Q-score: 0.51
Hong Q, Wang S, Wang X, Han W, Chen T, Liu Y, Cheng F, Qin S, Zhao S, Liu Q, Cong Y, Huang Z
Vaccines (Basel) (2024) 12 [ Pubmed: 39340107 DOI: doi:10.3390/vaccines12091077 ]
- Vp1 (33 kDa, Protein from Poliovirus 2)
- Poliovirus 2 (Virus from Poliovirus 2)
- Vp2 (29 kDa, Protein from Poliovirus 2)
- Vp3 (26 kDa, Protein from Poliovirus 2)
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Resolution: 2.32 Å
EM Method: Single-particle
Fitted PDBs: 7vyv
Q-score: 0.684
Cai R, Ren Z, Zhao R, Lu Y, Wang X, Guo Z, Song J, Xiang W, Du R, Zhang X, Han W, Ru H, Gu J
Microbiol Spectr (2023) 11 pp. e0530422-e0530422 [ DOI: doi:10.1128/spectrum.05304-22 Pubmed: 37750730 ]
- Depolymerase (98 kDa, Protein from Klebsiella phage GH-K3)
- Tail spike protein depo32 (300 kDa, Complex from Klebsiella phage 020009)
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Resolution: 2.46 Å
EM Method: Single-particle
Fitted PDBs: 7vz3
Q-score: -0.015
Cai R, Ren Z, Zhao R, Lu Y, Wang X, Guo Z, Song J, Xiang W, Du R, Zhang X, Han W, Ru H, Gu J
Microbiol Spectr (2023) 11 pp. e0530422-e0530422 [ DOI: doi:10.1128/spectrum.05304-22 Pubmed: 37750730 ]
- Tail spike protein depo32 (300 kDa, Complex from Klebsiella phage 020009)
- Depolymerase (100 kDa, Protein from Klebsiella phage GH-K3)
Cryo-EM structure of human TRiC-tubulin-S2
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7x3j
Q-score: 0.246
Liu C, Jin M, Wang S, Han W, Zhao Q, Wang Y, Xu C, Diao L, Yin Y, Peng C, Bao L, Wang Y, Cong Y
Commun Biol (2023) 6 pp. 531-531 [ Pubmed: 37193829 DOI: doi:10.1038/s42003-023-04915-x ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- T-complex protein 1 subunit beta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit eta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit theta (59 kDa, Protein from Homo sapiens)
- Human tric-tubulin-s2 (Complex from Homo sapiens)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Homo sapiens)
cryo-EM structure of human TRiC-ADP
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7x3u
Q-score: 0.323
Liu C, Jin M, Wang S, Han W, Zhao Q, Wang Y, Xu C, Diao L, Yin Y, Peng C, Bao L, Wang Y, Cong Y
Commun Biol (2023) 6 pp. 531-531 [ Pubmed: 37193829 DOI: doi:10.1038/s42003-023-04915-x ]
- T-complex protein 1 subunit beta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit eta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)
- Human tric-adp state (Complex from Homo sapiens)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit theta (59 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Homo sapiens)
cryo-EM structure of human TRiC-ATP-closed state
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7x6q
Q-score: 0.304
Liu C, Jin M, Wang S, Han W, Zhao Q, Wang Y, Xu C, Diao L, Yin Y, Peng C, Bao L, Wang Y, Cong Y
Commun Biol (2023) 6 pp. 531-531 [ Pubmed: 37193829 DOI: doi:10.1038/s42003-023-04915-x ]
- T-complex protein 1 subunit beta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Homo sapiens)
- Human tric-atp-closed state (Complex from Homo sapiens)
- T-complex protein 1 subunit eta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit theta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Homo sapiens)
Cryo-EM structure of Human TRiC-ATP-open state
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7x7y
Q-score: 0.259
Liu C, Jin M, Wang S, Han W, Zhao Q, Wang Y, Xu C, Diao L, Yin Y, Peng C, Bao L, Wang Y, Cong Y
Commun Biol (2023) 6 pp. 531-531 [ Pubmed: 37193829 DOI: doi:10.1038/s42003-023-04915-x ]
- T-complex protein 1 subunit beta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Homo sapiens)
- Human tric-atp-open state (Complex from Homo sapiens)
- T-complex protein 1 subunit eta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit theta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Homo sapiens)
Cryo-EM structure of the ribosome bound Bacteroides thetaiotaomicron EF-G2
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7uvp
Q-score: 0.459
To Be Published
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ribosome-bound bacteroides thetaiotaomicron ef-g2 (Complex from Bacteroides thetaiotaomicron VPI-5482)
- Water (18 Da, Ligand)
- Tetracycline resistance protein tetq (80 kDa, Protein from Bacteroides thetaiotaomicron VPI-5482)
Cryo-EM structure of human TRiC-NPP state
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7x0a
Q-score: 0.256
Liu C, Jin M, Wang S, Han W, Zhao Q, Wang Y, Xu C, Diao L, Yin Y, Peng C, Bao L, Wang Y, Cong Y
Commun Biol (2023) 6 pp. 531-531 [ Pubmed: 37193829 DOI: doi:10.1038/s42003-023-04915-x ]
- T-complex protein 1 subunit beta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit eta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit theta (59 kDa, Protein from Homo sapiens)
- Htric-npp (Complex from Homo sapiens)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Homo sapiens)