Cryo-EM structure of SARS-CoV-2 Omicron Spike protein with human ACE2 receptor, C2 state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7wvp
Q-score: 0.143
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ Pubmed: 35228716 DOI: doi:10.1038/s41586-022-04581-9 ]
- Human ace2 receptor (Complex)
- Cryo-em structure of sars-cov-2 omicron spike protein with human ace2 receptor, c2 state (Complex from Homo sapiens)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
Cryo-EM structure of SARS-CoV-2 Omicron Spike protein with human ACE2 receptor, C3 state
Resolution: 4.04 Å
EM Method: Single-particle
Fitted PDBs: 7wvq
Q-score: 0.057
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ Pubmed: 35228716 DOI: doi:10.1038/s41586-022-04581-9 ]
- Human ace2 receptor (Complex)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Omicron spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Cryo-em structure of sars-cov-2 omicron spike protein with human ace2 receptor, c3 state (Complex from Homo sapiens)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7wvn
Q-score: 0.247
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ Pubmed: 35228716 DOI: doi:10.1038/s41586-022-04581-9 ]
- Omicron s-open (Complex from Homo sapiens)
- Omicron s-open (Complex)
- Sars-cov-2 spike protein (Complex from Homo sapiens)
- Sars-cov-2 omicron varient (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus)
Resolution: 3.41 Å
EM Method: Single-particle
Fitted PDBs: 7wvo
Q-score: 0.254
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ Pubmed: 35228716 DOI: doi:10.1038/s41586-022-04581-9 ]
- Omicron s-open-2 (Complex from Homo sapiens)
- Sars-cov-2 spike protein (Complex from Homo sapiens)
- Sars-cov-2 omicron varient (Complex from Severe acute respiratory syndrome coronavirus 2)
- Omicron s-open-2 (Complex)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus)
Cryo-EM structure of SARS-CoV-2 Omicron spike protein with ACE2, C1 state
Resolution: 3.69 Å
EM Method: Single-particle
Fitted PDBs: 7wk4
Q-score: 0.233
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ DOI: doi:10.1038/s41586-022-04581-9 ]
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron spike protein (Complex)
- Complex of sars-cov-2 omicron spike protein with human ace2 (Complex from Homo sapiens)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of Omicron S-ACE2, C2 state
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 7wk5
Q-score: 0.202
Hong Q, Han W, Li J, Xu S, Wang Y, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
bioRxiv (2022) [ DOI: doi:10.1101/2022.01.10.475532 ]
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Cryo-em structure of sars-cov-2 omicron spike protein with human ace2 receptor, c2 state (Complex from Homo sapiens)
- Human ace2 receptor (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron spike protein (Complex)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 7wk6
Q-score: 0.379
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ DOI: doi:10.1038/s41586-022-04581-9 ]
- Angiotensin-converting enzyme 2 (72 kDa, Protein from Homo sapiens)
- Human ace2 (Complex)
- Cryo-em structure of sars-cov-2 omicron spike rbd with human ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron spike rbd (Complex from Homo sapiens)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Omicron open state spike protein in complex with S3H3 Fab
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 7wk9
Q-score: 0.204
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ Pubmed: 35228716 DOI: doi:10.1038/s41586-022-04581-9 ]
- Sars-cov-2 omicron open state spike protein in complex with s3h3 fab (Complex from Severe acute respiratory syndrome coronavirus 2)
- Light chain of s3h3 fab (23 kDa, Protein from Mus musculus)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of s3h3 fab (23 kDa, Protein from Mus musculus)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7wk2
Q-score: 0.293
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ Pubmed: 35228716 DOI: doi:10.1038/s41586-022-04581-9 ]
- Omicron s-close (Complex from Mus musculus)
- Omicron s-close (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein (Complex from Mus musculus)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Omicron s-close (Complex)
- Sars-cov-2 omicorn varient (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Omicron spike protein SD1 in complex with S3H3 Fab
Resolution: 3.61 Å
EM Method: Single-particle
Fitted PDBs: 7wk8
Q-score: 0.466
Hong Q, Han W, Li J, Xu S, Wang Y, Xu C, Li Z, Wang Y, Zhang C, Huang Z, Cong Y
Nature (2022) 604 pp. 546-552 [ Pubmed: 35228716 DOI: doi:10.1038/s41586-022-04581-9 ]
- Heavy chain of s3h3 fab (23 kDa, Protein from Mus musculus)
- Light chain of s3h3 fab (23 kDa, Protein from Mus musculus)
- Spike glycoprotein (140 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron spike in complex with s3h3 fab (Complex from Severe acute respiratory syndrome coronavirus 2)