Cryo-EM structure of mouse TRPML1 channel Y404W at 2.86 Angstrom resolution
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 9cbz
Q-score: 0.371
bioRxiv (2024) [ Pubmed: 39005349 DOI: doi:10.1101/2024.07.04.602033 ]
- Mouse trpml1 (Complex from Mus musculus)
- Mucolipin-1 (65 kDa, Protein from Mus musculus)
Cryo-EM structure of mouse PI(4,5)P2-bound TRPML1 channel at 2.46 Angstrom resolution
Resolution: 2.46 Å
EM Method: Single-particle
Fitted PDBs: 9cc2
Q-score: 0.616
bioRxiv (2024) [ Pubmed: 39005349 DOI: doi:10.1101/2024.07.04.602033 ]
- [(2r)-2-octanoyloxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate (746 Da, Ligand)
- Mucolipin-1 (65 kDa, Protein from Mus musculus)
- Mouse trpml1 (Complex from Mus musculus)
- Sphingomyelin (814 Da, Ligand)
Caenorhabditis elegans Otopetrin 8 (CeOtop8) in pH 8.0
Gan N, Zeng W, Han Y, Chen Q, Jiang Y
Nat Commun (2024) 15 pp. 7250-7250 [ Pubmed: 39179582 DOI: doi:10.1038/s41467-024-51803-x ]
- Ceotop8 (Complex from Caenorhabditis elegans)
- Otopetrin-2 (69 kDa, Protein from Caenorhabditis elegans)
Caenorhabditis elegans Otopetrin 8 (CeOtop8) in pH 5.0
Gan N, Zeng W, Han Y, Chen Q, Jiang Y
Nat Commun (2024) 15 pp. 7250-7250 [ Pubmed: 39179582 DOI: doi:10.1038/s41467-024-51803-x ]
- Ceotop8 (Complex from Caenorhabditis elegans)
- Otopetrin-2 (69 kDa, Protein from Caenorhabditis elegans)
Mus musculus Otopetrin 2 (mOTOP2) in pH 5.0
Gan N, Zeng W, Han Y, Chen Q, Jiang Y
Nat Commun (2024) 15 pp. 7250-7250 [ Pubmed: 39179582 DOI: doi:10.1038/s41467-024-51803-x ]
- Proton channel otop2 (62 kDa, Protein from Mus musculus)
- Motop2 (Complex from Mus musculus)
Mus musculus Otopetrin 2 (mOTOP2) in pH 8.0
Gan N, Zeng W, Han Y, Chen Q, Jiang Y
Nat Commun (2024) 15 pp. 7250-7250 [ Pubmed: 39179582 DOI: doi:10.1038/s41467-024-51803-x ]
- Proton channel otop2 (62 kDa, Protein from Mus musculus)
- Motop2 (Complex from Mus musculus)
Mus musculus Otopetrin 2 (mOTOP2) in pH 7.0, intermediate state
Gan N, Zeng W, Han Y, Chen Q, Jiang Y
Nat Commun (2024) 15 pp. 7250-7250 [ Pubmed: 39179582 DOI: doi:10.1038/s41467-024-51803-x ]
- Proton channel otop2 (62 kDa, Protein from Mus musculus)
- Motop2 (Complex from Mus musculus)
Mus musculus Otopetrin 2 (mOTOP2) M374W in pH 8.0
Gan N, Zeng W, Han Y, Chen Q, Jiang Y
Nat Commun (2024) 15 pp. 7250-7250 [ Pubmed: 39179582 DOI: doi:10.1038/s41467-024-51803-x ]
- Proton channel otop2 (62 kDa, Protein from Mus musculus)
- Motop2 (Complex from Mus musculus)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8sgt
Q-score: 0.239
Xue J, Zeng W, Han Y, John S, Ottolia M, Jiang Y
Nat Commun (2023) 14 pp. 6181-6181 [ Pubmed: 37794011 DOI: doi:10.1038/s41467-023-41885-4 ]
- Human ncx1 in complex with antibody fab fragment (Complex)
- Human ncx1 in ca bound, activated state (Complex from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Sodium/calcium exchanger 1 (109 kDa, Protein from Homo sapiens)
- Fab heavy chain (26 kDa, Protein from Mus musculus)
- Antibody fab fragment (Complex from Mus musculus)
- Fab light chain (21 kDa, Protein from Mus musculus)
Human TMEM175-LAMP1 full-length complex
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8fy5
Q-score: 0.505
Zhang J, Zeng W, Han Y, Lee WR, Liou J, Jiang Y
Mol Cell (2023) 83 pp. 2524-2539.e7 [ Pubmed: 37390818 DOI: doi:10.1016/j.molcel.2023.06.004 ]
- Tmem175-lamp1 full-length (Complex from Homo sapiens)
- Endosomal/lysosomal potassium channel tmem175 (55 kDa, Protein from Homo sapiens)
- Lysosome-associated membrane glycoprotein 1 (44 kDa, Protein from Homo sapiens)