Asarnow D, Wang B, Lee WH, Hu Y, Huang CW, Faust B, Ng PML, Ngoh EZX, Bohn M, Bulkley D, Pizzorno A, Ary B, Tan HC, Lee CY, Minhat RA, Terrier O, Soh MK, Teo FJ, Yeap YYC, Seah SGK, Chan CEZ, Connelly E, Young NJ, Maurer-Stroh S, Renia L, Hanson BJ, Rosa-Calatrava M, Manglik A, Cheng Y, Craik CS, Wang CI
Cell (2021) 184 pp. 3192-3204.e16 [ DOI: doi:10.1016/j.cell.2021.04.033 ]
SARS-CoV-2 spike glycoprotein:Fab 5A6 complex I
Resolution: 2.42 Å
EM Method: Single-particle
Fitted PDBs: 7kqb
Q-score: 0.437
Asarnow D, Wang B, Lee WH, Hu Y, Huang CW, Faust B, Ng PML, Ngoh EZX, Bohn M, Bulkley D, Pizzorno A, Ary B, Tan HC, Lee CY, Minhat RA, Terrier O, Soh MK, Teo FJ, Yeap YYC, Seah SGK, Chan CEZ, Connelly E, Young NJ, Maurer-Stroh S, Renia L, Hanson BJ, Rosa-Calatrava M, Manglik A, Cheng Y, Craik CS, Wang CI
Cell (2021) 184 pp. 3192-3204.e16 [ Pubmed: 33974910 DOI: doi:10.1016/j.cell.2021.04.033 ]
- Fab 5a6 (Complex from Homo sapiens)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab 5a6 heavy chain (49 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike protein trimer in complex with fab 5a6 (complex i) (457 kDa, Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Fab 5a6 light chain (23 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike protein in complex with Fab 2H4
Asarnow D, Wang B, Lee WH, Hu Y, Huang CW, Faust B, Ng PML, Ngoh EZX, Bohn M, Bulkley D, Pizzorno A, Ary B, Tan HC, Lee CY, Minhat RA, Terrier O, Soh MK, Teo FJ, Yeap YYC, Seah SGK, Chan CEZ, Connelly E, Young NJ, Maurer-Stroh S, Renia L, Hanson BJ, Rosa-Calatrava M, Manglik A, Cheng Y, Craik CS, Wang CI
Cell (2021) 184 pp. 3192-3204.e16 [ Pubmed: 33974910 DOI: doi:10.1016/j.cell.2021.04.033 ]
SARS-CoV-2 spike glycoprotein:Fab 3D11 complex
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 7kqe
Q-score: 0.333
Asarnow D, Wang B, Lee WH, Hu Y, Huang CW, Faust B, Ng PML, Ngoh EZX, Bohn M, Bulkley D, Pizzorno A, Ary B, Tan HC, Lee CY, Minhat RA, Terrier O, Soh MK, Teo FJ, Yeap YYC, Seah SGK, Chan CEZ, Connelly E, Young NJ, Maurer-Stroh S, Renia L, Hanson BJ, Rosa-Calatrava M, Manglik A, Cheng Y, Craik CS, Wang CI
Cell (2021) 184 pp. 3192-3204.e16 [ Pubmed: 33974910 DOI: doi:10.1016/j.cell.2021.04.033 ]
- Sars-cov-2 spike protein trimer in complex with fab 3d11 (457 kDa, Complex)
- Fab 3d11 light chain (23 kDa, Protein from Homo sapiens)
- Fab 3d11 (Complex from Homo sapiens)
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab 3d11 heavy chain (49 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike:5A6 Fab complex I focused refinement
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 7m71
Q-score: 0.495
Asarnow D, Wang B, Lee WH, Hu Y, Huang CW, Faust B, Ng PML, Ngoh EZX, Bohn M, Bulkley D, Pizzorno A, Ary B, Tan HC, Lee CY, Minhat RA, Terrier O, Soh MK, Teo FJ, Yeap YYC, Seah SGK, Chan CEZ, Connelly E, Young NJ, Maurer-Stroh S, Renia L, Hanson BJ, Rosa-Calatrava M, Manglik A, Cheng Y, Craik CS, Wang CI
Cell (2021) 184 pp. 3192- [ Pubmed: 33974910 DOI: doi:10.1016/j.cell.2021.04.033 ]
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Antibody 5a6 fab heavy chain (49 kDa, Protein from Homo sapiens)
- 5a6 fab (Complex from Homo sapiens)
- Antibody 5a6 fab light chain (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike protein trimer in complex with 5a6 fab (complex i) (457 kDa, Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
SARS-CoV-2 Spike:Fab 3D11 complex focused refinement
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 7m7b
Q-score: 0.506
Asarnow D, Wang B, Lee WH, Hu Y, Huang CW, Faust B, Ng PML, Ngoh EZX, Bohn M, Bulkley D, Pizzorno A, Ary B, Tan HC, Lee CY, Minhat RA, Terrier O, Soh MK, Teo FJ, Yeap YYC, Seah SGK, Chan CEZ, Connelly E, Young NJ, Maurer-Stroh S, Renia L, Hanson BJ, Rosa-Calatrava M, Manglik A, Cheng Y, Craik CS, Wang CI
Cell (2021) 184 pp. 3192- [ Pubmed: 33974910 DOI: doi:10.1016/j.cell.2021.04.033 ]
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike protein trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Fab 3d11 (Complex from Homo sapiens)
- Antibody fab 3d11 heavy chain (49 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Antibody fab 3d11 light chain (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike protein trimer in complex with fab 3d11 (457 kDa, Complex)
Three-dimensional structure of Dengue virus serotype 1 complexed with HMAb 14c10 Fab
Resolution: 7.0 Å
EM Method: Single-particle
Fitted PDBs: 3j05
Q-score: 0.153
Teoh EP, Kukkaro P, Teo EW, Lim AP, Tan TT, Yip A, Schul W, Aung M, Kostyuchenko VA, Leo YS, Chan SH, Smith KG, Chan AH, Zou G, Ooi EE, Kemeny DM, Tan GK, Ng JK, Ng ML, Alonso S, Fisher D, Shi PY, Hanson BJ, Lok SM, MacAry PA
Sci Transl Med (2012) 4 pp. 139ra83-139ra83 [ DOI: doi:10.1126/scitranslmed.3003888 Pubmed: 22723463 ]