Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9h9e
Q-score: 0.372
Hooda Y, Sente A, Judy RM, Smalinskaite L, Chew SP, Naydenova K, Malinauskas T, Hardwick SW, Chirgadze DY, Aricescu AR, Hegde RS
bioRxiv (2024) [ DOI: doi:10.1101/2024.10.28.620708 Pubmed: 39553992 ]
- Cholesterol (386 Da, Ligand)
- (7s)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Gamma-aminobutyric acid receptor subunit alpha-1 (54 kDa, Protein from Homo sapiens)
- Complex of gamma-aminobutyric acid receptor subunit alpha-1 with assembly factor nacho/tmem35a (Complex from Homo sapiens)
- 1,2-dipalmitoyl-sn-glycero-3-phosphate (647 Da, Ligand)
- (1s)-2-{[{[(2r)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (751 Da, Ligand)
- Novel acetylcholine receptor chaperone (20 kDa, Protein from Homo sapiens)
Structure of human mitochondrial RNase P in complex with mitochondrial pre-tRNA-His(5,Ser)
Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 8cbk
Q-score: 0.452
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ DOI: doi:10.1038/s41467-024-49132-0 Pubmed: 38824131 ]
- Mitochondrial ribonuclease p catalytic subunit (61 kDa, Protein from Homo sapiens)
- 3-hydroxyacyl-coa dehydrogenase type-2 (26 kDa, Protein from Homo sapiens)
- Trna methyltransferase 10 homolog c (48 kDa, Protein from Homo sapiens)
- Mitochondrial precursor trna-his(5,ser) (29 kDa, RNA from Homo sapiens)
- Water (18 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Human mitochondrial rnase p in complex with mitochondrial pre-trnahis-ser (269 kDa, Complex from Homo sapiens)
Structure of human mitochondrial RNase Z in complex with mitochondrial pre-tRNA-His(0,Ser)
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 8cbl
Q-score: 0.443
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ Pubmed: 38824131 DOI: doi:10.1038/s41467-024-49132-0 ]
- Human mitochondrial rnase p in complex with mitochondrial pre-trna-his(0,ser) (300 kDa, Complex from Homo sapiens)
- Mitochondrial precursor trna-his(0,ser) (40 kDa, RNA from Homo sapiens)
- Trna methyltransferase 10 homolog c (48 kDa, Protein from Homo sapiens)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Zinc phosphodiesterase elac protein 2 (92 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- 3-hydroxyacyl-coa dehydrogenase type-2 (26 kDa, Protein from Homo sapiens)
Structure of human mitochondrial CCA-adding enzyme in complex with mitochondrial pre-tRNA-Ile
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8cbm
Q-score: 0.428
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ Pubmed: 38824131 DOI: doi:10.1038/s41467-024-49132-0 ]
- Water (18 Da, Ligand)
- Cytidine-5'-diphosphate (403 Da, Ligand)
- Mitochondrial precursor trna-ile(0,0) (22 kDa, RNA from Homo sapiens)
- Trna methyltransferase 10 homolog c (48 kDa, Protein from Homo sapiens)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Human mitochondrial cca-adding enzyme in complex with mitochondrial pre-trnaile (270 kDa, Complex from Homo sapiens)
- Cca trna nucleotidyltransferase 1, mitochondrial (44 kDa, Protein from Homo sapiens)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- 3-hydroxyacyl-coa dehydrogenase type-2 (26 kDa, Protein from Homo sapiens)
Structure of human mitochondrial MRPP1-MRPP2 in complex with mitochondrial pre-tRNA-Ile
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8cbo
Q-score: 0.469
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ Pubmed: 38824131 DOI: doi:10.1038/s41467-024-49132-0 ]
- 3-hydroxyacyl-coa dehydrogenase type-2 (26 kDa, Protein from Homo sapiens)
- Mitochondrial precursor trna-ile(5,4) (25 kDa, RNA from Homo sapiens)
- Human mitochondrial mrpp1-mrpp2 (Complex from Homo sapiens)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Mitochondrial pre-trnaile (Complex from Homo sapiens)
- Trna methyltransferase 10 homolog c (24 kDa, Protein from Homo sapiens)
- Human mitochondrial mrpp1-mrpp2 in complex with mitochondrial pre-trnaile (170 kDa, Complex)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ Pubmed: 38824131 DOI: doi:10.1038/s41467-024-49132-0 ]
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ DOI: doi:10.1038/s41467-024-49132-0 Pubmed: 38824131 ]
Cryo-EM structure of human mitochondrial RNase P in complex with mitochondrial pre-tRNA-His(5,Ser)
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ Pubmed: 38824131 DOI: doi:10.1038/s41467-024-49132-0 ]
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ Pubmed: 38824131 DOI: doi:10.1038/s41467-024-49132-0 ]
Local refinement - Map 2 (mask 1)
Meynier V, Hardwick SW, Catala M, Roske JJ, Oerum S, Chirgadze DY, Barraud P, Yue WW, Luisi BF, Tisne C
Nat Commun (2024) 15 pp. 4683-4683 [ DOI: doi:10.1038/s41467-024-49132-0 Pubmed: 38824131 ]