Zorya anti-bacteriophage defense system ZorC WT
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8r68
Q-score: 0.268
Hu H, Popp PF, Hughes TCD, Roa-Eguiara A, Rutbeek NR, Martin FJO, Hendriks IA, Payne LJ, Yan Y, Humolli D, Klein-Sousa V, Songailiene I, Wang Y, Nielsen ML, Berry RM, Harms A, Erhardt M, Jackson SA, Taylor NMI
Nature (2024) [ DOI: doi:10.1038/s41586-024-08493-8 Pubmed: 39662505 ]
Zorya anti-bacteriophage defense system ZorD apo form
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 8qy7
Q-score: 0.571
Hu H, Popp PF, Hughes TCD, Roa-Eguiara A, Rutbeek NR, Martin FJO, Hendriks IA, Payne LJ, Yan Y, Humolli D, Klein-Sousa V, Songailiene I, Wang Y, Nielsen ML, Berry RM, Harms A, Erhardt M, Jackson SA, Taylor NMI
Nature (2024) [ DOI: doi:10.1038/s41586-024-08493-8 Pubmed: 39662505 ]
Zorya anti-bacteriophage defense system ZorD in complex with ATP-gamma-S
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 8qyc
Q-score: 0.565
Hu H, Popp PF, Hughes TCD, Roa-Eguiara A, Rutbeek NR, Martin FJO, Hendriks IA, Payne LJ, Yan Y, Humolli D, Klein-Sousa V, Songailiene I, Wang Y, Nielsen ML, Berry RM, Harms A, Erhardt M, Jackson SA, Taylor NMI
Nature (2024) [ DOI: doi:10.1038/s41586-024-08493-8 Pubmed: 39662505 ]
Zorya anti-bacteriophage defense system ZorAB
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 8qyd
Q-score: 0.506
Hu H, Popp PF, Hughes TCD, Roa-Eguiara A, Rutbeek NR, Martin FJO, Hendriks IA, Payne LJ, Yan Y, Humolli D, Klein-Sousa V, Songailiene I, Wang Y, Nielsen ML, Berry RM, Harms A, Erhardt M, Jackson SA, Taylor NMI
Nature (2024) [ DOI: doi:10.1038/s41586-024-08493-8 Pubmed: 39662505 ]
- Water (18 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Zorya anti-bacteriophage defense system zorab (Cellular component from Escherichia coli)
- Palmitic acid (256 Da, Ligand)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Membrane protein (28 kDa, Protein from Escherichia coli)
- Anti-phage defense zorab system zora (80 kDa, Protein from Escherichia coli)
- Cardiolipin (1 kDa, Ligand)
Zorya anti-bacteriophage defense system ZorAB ZorA E86A_E89A, Calcium binding site mutation
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8qyh
Q-score: 0.51
Hu H, Popp PF, Hughes TCD, Roa-Eguiara A, Rutbeek NR, Martin FJO, Hendriks IA, Payne LJ, Yan Y, Humolli D, Klein-Sousa V, Songailiene I, Wang Y, Nielsen ML, Berry RM, Harms A, Erhardt M, Jackson SA, Taylor NMI
Nature (2024) [ DOI: doi:10.1038/s41586-024-08493-8 Pubmed: 39662505 ]
- Zorya anti-bacteriophage defense system zorab zora e86a_e89a, calcium binding site mutation (Cellular component from Escherichia coli)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Anti-phage defense zorab system zora (31 kDa, Protein from Escherichia coli)
- Membrane protein (28 kDa, Protein from Escherichia coli)
- Cardiolipin (1 kDa, Ligand)
- Water (18 Da, Ligand)
Zorya anti-bacteriophage defense system ZorAB, ZorA delta_359-592, ZorA tail middle deletion.
Resolution: 2.07 Å
EM Method: Single-particle
Fitted PDBs: 8qyk
Q-score: 0.544
Hu H, Popp PF, Hughes TCD, Roa-Eguiara A, Rutbeek NR, Martin FJO, Hendriks IA, Payne LJ, Yan Y, Humolli D, Klein-Sousa V, Songailiene I, Wang Y, Nielsen ML, Berry RM, Harms A, Erhardt M, Jackson SA, Taylor NMI
Nature (2024) [ DOI: doi:10.1038/s41586-024-08493-8 Pubmed: 39662505 ]
- Calcium ion (40 Da, Ligand)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Anti-phage defense zorab system zora (54 kDa, Protein from Escherichia coli)
- Membrane protein (28 kDa, Protein from Escherichia coli)
- Cardiolipin (1 kDa, Ligand)
- Zorya anti-bacteriophage defense system zorab, zora delta_359-592, zora tail middle deletion. (Cellular component from Escherichia coli)
- Water (18 Da, Ligand)
Zorya anti-bacteriophage defense system ZorAB, ZorA delta_435-729, ZorA tail tip deletion.
Resolution: 2.56 Å
EM Method: Single-particle
Fitted PDBs: 8qyy
Q-score: 0.448
Hu H, Popp PF, Hughes TCD, Roa-Eguiara A, Rutbeek NR, Martin FJO, Hendriks IA, Payne LJ, Yan Y, Humolli D, Klein-Sousa V, Songailiene I, Wang Y, Nielsen ML, Berry RM, Harms A, Erhardt M, Jackson SA, Taylor NMI
Nature (2024) [ DOI: doi:10.1038/s41586-024-08493-8 Pubmed: 39662505 ]
- Calcium ion (40 Da, Ligand)
- 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
- Anti-phage defense zorab system zora (48 kDa, Protein from Escherichia coli)
- Zorya anti-bacteriophage defense system zorab, zora delta_435-729, zora tail tip deletion. (Cellular component from Escherichia coli)
- Membrane protein (28 kDa, Protein from Escherichia coli)
- Cardiolipin (1 kDa, Ligand)
- Water (18 Da, Ligand)
in situ 70S Myxococcus xanthus ribosome
Xu P, Schumacher D, Liu C, Harms A, Dickmanns M, Beck F, Plitzko JM, Baumeister W, Sogaard-Andersen L
PNAS (2025) 122 pp. e2419610121-e2419610121 [ Pubmed: 39739804 DOI: doi:10.1073/pnas.2419610121 ]
PomX filament from Myxococcus xanthus
Xu P, Schumacher D, Liu C, Harms A, Dickmanns M, Beck F, Plitzko JM, Baumeister W, Sogaard-Andersen L
PNAS (2025) 122 pp. e2419610121-e2419610121 [ Pubmed: 39739804 DOI: doi:10.1073/pnas.2419610121 ]