Cryo-EM structure of B. subtilis ClpC (DWB mutant) hexamer bound to a substrate polypeptide
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7abr
Q-score: 0.454
Morreale FE, Kleine S, Leodolter J, Junker S, Hoi DM, Ovchinnikov S, Okun A, Kley J, Kurzbauer R, Junk L, Guha S, Podlesainski D, Kazmaier U, Boehmelt G, Weinstabl H, Rumpel K, Schmiedel VM, Hartl M, Haselbach D, Meinhart A, Kaiser M, Clausen T
Cell (2022) 185 pp. 2338- [ Pubmed: 35662409 DOI: doi:10.1016/j.cell.2022.05.009 ]
- Negative regulator of genetic competence clpc/mecb (91 kDa, Protein from Bacillus subtilis (strain 168))
- Negative regulator of genetic competence clpc/mecb (Complex from Bacillus subtilis subsp. subtilis str. 168)
- Substrate polypeptide (Complex from unidentified)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- B. subtilis clpc (dwb mutant) hexamer bound to a substrate polypeptide (Complex from Bacillus subtilis subsp. subtilis str. 168)
- Substrate polypeptide (2 kDa, Protein from unidentified)
CryoEM structure of Rubisco Activase with its substrate Rubisco from Nostoc sp. (strain PCC7120)
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 6z1f
Q-score: 0.489
Flecken M, Wang H, Popilka L, Hartl FU, Bracher A, Hayer-Hartl M
Cell (2020) 183 pp. 457-473.e20 [ Pubmed: 32979320 DOI: doi:10.1016/j.cell.2020.09.010 ]
- Ribulose bisphosphate carboxylase/oxygenase activase (32 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Aaa-core of the rca hexamer from nostoc sp. pcc7120 in complex with atp/atpgammas (Complex from Nostoc sp. PCC 7120 = FACHB-418)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- 2-carboxyarabinitol-1,5-diphosphate (356 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Nosrca-deltac:rubisco complex (Complex from Nostoc sp. PCC 7120 = FACHB-418)
- Rubisco complex from nostoc sp. pcc7120 in complex with inhibitor cabp (Complex from Nostoc sp. PCC 7120 = FACHB-418)
- Ribulose bisphosphate carboxylase small chain (12 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Ribulose bisphosphate carboxylase large chain (53 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
Resolution: 8.2 Å
EM Method: Single-particle
Fitted PDBs: 6z1g
Q-score: 0.125
Flecken M, Wang H, Popilka L, Hartl FU, Bracher A, Hayer-Hartl M
Cell (2020) 183 pp. 457-473.e20 [ Pubmed: 32979320 DOI: doi:10.1016/j.cell.2020.09.010 ]
- Ribulose bisphosphate carboxylase large chain (53 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Complex between rubisco activase small-subunit-like domain with rubisco from nostoc sp. (strain pcc7120) (Complex from Nostoc sp. PCC 7120 = FACHB-418)
- Ribulose bisphosphate carboxylase/oxygenase activase (10 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- (rbcl)2(rbcs)2 unit of the (rbcl)8(rbcs)8 rubisco complex (Complex from Nostoc sp. PCC 7120 = FACHB-418)
- Ribulose bisphosphate carboxylase small chain (12 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Ssul domain of rca, part of the (rca)6 hexamer (Complex from Nostoc sp. PCC 7120 = FACHB-418)
Flecken M, Wang H, Popilka L, Hartl FU, Bracher A, Hayer-Hartl M
Cell (2020) 183 pp. 457-473.e20 [ Pubmed: 32979320 DOI: doi:10.1016/j.cell.2020.09.010 ]
- Aaa-core of the rca hexamer from nostoc sp. pcc7120 in complex with atp/atpgammas (Complex from Nostoc sp. PCC 7120 = FACHB-418)
- Nosrca-deltac:rubisco complex (Complex from Nostoc sp. PCC 7120 = FACHB-418)
- Rubisco complex from nostoc sp. pcc7120 in complex with inhibitor cabp (Complex from Nostoc sp. PCC 7120 = FACHB-418)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 6tmv
Q-score: 0.335
Bracher A, Paul SS, Wang H, Wischnewski N, Hartl FU, Hayer-Hartl M
PLoS One (2020) 15 pp. e0230090-e0230090 [ DOI: doi:10.1371/journal.pone.0230090 Pubmed: 32339190 ]
Resolution: 5.91 Å
EM Method: Single-particle
Fitted PDBs: 6tmw
Q-score: 0.173
Bracher A, Paul SS, Wang H, Wischnewski N, Hartl FU, Hayer-Hartl M
PLoS One (2020) 15 pp. e0230090-e0230090 [ DOI: doi:10.1371/journal.pone.0230090 Pubmed: 32339190 ]
Resolution: 5.8 Å
EM Method: Single-particle
Fitted PDBs: 6tmx
Q-score: 0.163
Bracher A, Paul SS, Wang H, Wischnewski N, Hartl FU, Hayer-Hartl M
PLoS One (2020) 15 pp. e0230090-e0230090 [ DOI: doi:10.1371/journal.pone.0230090 Pubmed: 32339190 ]
- The chaperonin gp146 from the bacteriophage el (pseudomonas aeruginosa) in complex with atpgammas (864 kDa, Complex from Pseudomonas phage EL)
- Magnesium ion (24 Da, Ligand)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Potassium ion (39 Da, Ligand)
- Putative groel-like chaperonine protein (61 kDa, Protein from Pseudomonas phage EL)
Structure of Rubisco from Rhodobacter sphaeroides in complex with CABP
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 5nv3
Q-score: 0.484
Bhat JY, Milicic G, Thieulin-Pardo G, Bracher A, Maxwell A, Ciniawsky S, Mueller-Cajar O, Engen JR, Hartl FU, Wendler P, Hayer-Hartl M
Mol Cell (2017) 67 pp. 744-756.e6 [ Pubmed: 28803776 DOI: doi:10.1016/j.molcel.2017.07.004 ]
- Magnesium ion (24 Da, Ligand)
- 2-carboxyarabinitol-1,5-diphosphate (356 Da, Ligand)
- Ribulose bisphosphate carboxylase large chain (51 kDa, Protein from Rhodobacter sphaeroides)
- Ribulose bisphosphate carboxylase small chain 1 (15 kDa, Protein from Rhodobacter sphaeroides)
- Rubisco (Complex from Rhodobacter sphaeroides)
Structure of Rubisco from Rhodobacter sphaeroides in complex with CABP
Bhat JY, Milicic G, Thieulin-Pardo G, Bracher A, Maxwell A, Ciniawsky S, Mueller-Cajar O, Engen JR, Hartl FU, Wendler P, Hayer-Hartl M
Mol Cell (2017) 67 pp. 744-756.e6 [ Pubmed: 28803776 DOI: doi:10.1016/j.molcel.2017.07.004 ]
- Rbcl (Protein from Rhodobacter sphaeroides)
- Rbcs (Protein from Rhodobacter sphaeroides)
- Rubisco (Complex from Rhodobacter sphaeroides)
Structure of Rubisco from Rhodobacter sphaeroides in complex with CABP and RcaCC
Bhat JY, Milicic G, Thieulin-Pardo G, Bracher A, Maxwell A, Ciniawsky S, Mueller-Cajar O, Engen JR, Hartl FU, Wendler P, Hayer-Hartl M
Mol Cell (2017) 67 pp. 744-756.e6 [ Pubmed: 28803776 DOI: doi:10.1016/j.molcel.2017.07.004 ]
- Rbcl (Protein from Rhodobacter sphaeroides)
- Rbcs (Protein from Rhodobacter sphaeroides)
- Rubisco-rcacc complex (768 kDa, Complex from Rhodobacter sphaeroides)
- Cbbx (Protein from Rhodobacter sphaeroides)