Cryo-EM structure of Arf1-decorated membrane tubules
Resolution: 3.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 8s5c
Q-score: 0.508
Haupt C, Semchonok DA, Stubbs MT, Bacia K, Desfosses A
To Be Published
- Water (18 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Adp-ribosylation factor 1 (20 kDa, Protein from Saccharomyces cerevisiae)
- Arf1 coated membrane tubules (Complex from Saccharomyces cerevisiae)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
Cryo-EM structure of Arf1-decorated membrane tubules
Resolution: 3.79 Å
EM Method: Helical reconstruction
Fitted PDBs: 8s5d
Q-score: 0.302
Haupt C, Semchonok DA, Stubbs MT, Bacia K, Desfosses A
To Be Published
- Water (18 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Adp-ribosylation factor 1 (20 kDa, Protein from Saccharomyces cerevisiae)
- Arf1 coated membrane tubules (Complex from Saccharomyces cerevisiae)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
Cryo-EM structure of Arf1-decorated membrane tubules
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8s5e
Q-score: 0.569
Haupt C, Semchonok DA, Stubbs MT, Bacia K, Desfosses A
Cell Structure (2024)
- Water (18 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Adp-ribosylation factor 1 (20 kDa, Protein from Saccharomyces cerevisiae)
- Heptameric complex of arf1 with gsp and mg (Complex from Saccharomyces cerevisiae)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
Cryo-EM structure of the D87G lysozyme amyloid fibril
Resolution: 2.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 8r4a
Q-score: 0.599
Karimi-Farsijani S, Sharma K, Ugrina M, Kuhn L, Pfeiffer PB, Haupt C, Wiese S, Hegenbart U, Schonland SO, Schwierz N, Schmidt M, Fandrich M
Nat Commun (2024) 15 pp. 9648-9648 [ DOI: doi:10.1038/s41467-024-54091-7 Pubmed: 39511224 ]
- Lysozyme c (14 kDa, Protein from Homo sapiens)
- Lysd87g amyloid fibril (Complex from Homo sapiens)
AL amyloid fibril from the FOR010 light chain
Resolution: 2.25 Å
EM Method: Helical reconstruction
Fitted PDBs: 8r47
Q-score: 0.651
Karimi-Farsijani S, Pfeiffer PB, Banerjee S, Baur J, Kuhn L, Kupfer N, Hegenbart U, Schonland SO, Wiese S, Haupt C, Schmidt M, Fandrich M
Nat Commun (2024) 15 pp. 5121-5121 [ Pubmed: 38879609 DOI: doi:10.1038/s41467-024-49520-6 ]
AL amyloid fibril from the FOR103 light chain
Resolution: 2.92 Å
EM Method: Helical reconstruction
Fitted PDBs: 9eme
Q-score: 0.562
Karimi-Farsijani S, Pfeiffer PB, Banerjee S, Baur J, Kuhn L, Kupfer N, Hegenbart U, Schonland SO, Wiese S, Haupt C, Schmidt M, Fandrich M
Nat Commun (2024) 15 pp. 5121-5121 [ Pubmed: 38879609 DOI: doi:10.1038/s41467-024-49520-6 ]
Amyloid fibril structure from the vascular variant of systemic AA amyloidosis
Banerjee S, Baur J, Daniel C, Pfeiffer PB, Hitzenberger M, Kuhn L, Wiese S, Bijzet J, Haupt C, Amann KU, Zacharias M, Hazenberg BPC, Westermark GT, Schmidt M, Fändrich M
Nat Commun (2022) 13 pp. 7261-7268 [ DOI: 10.1038/s41467-022-34636-4 Pubmed: 36433936 ]
Image sets:
Amyloid fibril from human systemic AA amyloidosis (vascular variant)
Resolution: 2.56 Å
EM Method: Helical reconstruction
Fitted PDBs: 7zky
Q-score: 0.519
Banerjee S, Baur J, Daniel C, Pfeiffer PB, Hitzenberger M, Kuhn L, Wiese S, Bijzet J, Haupt C, Amann KU, Zacharias M, Hazenberg BPC, Westermark GT, Schmidt M, Fandrich M
Nat Commun (2022) 13 pp. 7261-7261 [ DOI: doi:10.1038/s41467-022-34636-4 Pubmed: 36433936 ]
major seeded in vitro fibril morphology from murine SAA1.1 protein
Resolution: 2.69 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ovt
Q-score: 0.624
Heerde T, Rennegarbe M, Biedermann A, Savran D, Pfeiffer PB, Hitzenberger M, Baur J, Puscalau-Girtu I, Zacharias M, Schwierz N, Haupt C, Schmidt M, Fandrich M
Nat Commun (2022) 13 pp. 85-85 [ Pubmed: 35013242 DOI: doi:10.1038/s41467-021-27688-5 ]
- Serum amyloid a-2 protein (11 kDa, Protein from Mus musculus)
- Murine serum amyloid a1 (saa1) amyloid fibril (Complex from Mus musculus)
AL amyloid fibril from a lambda 1 light chain
Resolution: 3.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 7nsl
Q-score: 0.523
Radamaker L, Karimi-Farsijani S, Andreotti G, Baur J, Neumann M, Schreiner S, Berghaus N, Motika R, Haupt C, Walther P, Schmidt V, Huhn S, Hegenbart U, Schonland SO, Wiese S, Read C, Schmidt M, Fandrich M
Nat Commun (2021) 12 pp. 6434-6434 [ Pubmed: 34741031 DOI: doi:10.1038/s41467-021-26553-9 ]