KaiCB circadian clock backbone model based on a Cryo-EM density
Snijder J, Schuller JM, Wiegard A, Lossl P, Schmelling N, Axmann IM, Plitzko JM, Forster F, Heck AJ
Science (2017) 355 pp. 1181-1184 [ Pubmed: 28302852 DOI: doi:10.1126/science.aag3218 ]
KaiCBA circadian clock backbone model based on a Cryo-EM density
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 5n8y
Q-score: 0.286
Snijder J, Schuller JM, Wiegard A, Lossl P, Schmelling N, Axmann IM, Plitzko JM, Forster F, Heck AJ
Science (2017) 355 pp. 1181-1184 [ Pubmed: 28302852 DOI: doi:10.1126/science.aag3218 ]
- Kaicba circadian clock complex (Complex from Synechococcus elongatus)
- Circadian clock protein kinase kaic (58 kDa, Protein from Synechococcus elongatus)
- Circadian clock protein kaia (32 kDa, Protein from Synechococcus elongatus)
- Circadian clock protein kaib (11 kDa, Protein from Synechococcus elongatus)
Cryo-EM reconstruction of AaLS-wt
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 5mpp
Q-score: 0.197
Sasaki E, Bohringer D, van de Waterbeemd M, Leibundgut M, Zschoche R, Heck AJ, Ban N, Hilvert D
Nat Commun (2017) 8 pp. 14663-14663 [ Pubmed: 28281548 DOI: doi:10.1038/ncomms14663 ]
- Aals-wt (Complex from Aquifex aeolicus)
- 6,7-dimethyl-8-ribityllumazine synthase (16 kDa, Protein from Aquifex aeolicus)
Cryo-EM reconstruction of AaLS-neg
Resolution: 5.4 Å
EM Method: Single-particle
Fitted PDBs: 5mq3
Q-score: 0.135
Sasaki E, Bohringer D, van de Waterbeemd M, Leibundgut M, Zschoche R, Heck AJ, Ban N, Hilvert D
Nat Commun (2017) 8 pp. 14663-14663 [ Pubmed: 28281548 DOI: doi:10.1038/ncomms14663 ]
- 6,7-dimethyl-8-ribityllumazine synthase (17 kDa, Protein from Aquifex aeolicus)
- Aals-neg (Complex from Aquifex aeolicus)
Cryo-EM reconstruction of AaLS-13
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 5mq7
Q-score: 0.05
Sasaki E, Bohringer D, van de Waterbeemd M, Leibundgut M, Zschoche R, Heck AJ, Ban N, Hilvert D
Nat Commun (2017) 8 pp. 14663-14663 [ Pubmed: 28281548 DOI: doi:10.1038/ncomms14663 ]
- Aals-13 (Complex from Aquifex aeolicus)
- 6,7-dimethyl-8-ribityllumazine synthase (17 kDa, Protein from Aquifex aeolicus)
Architecture of the complex formed by large and small Terminase subunits from Bacteriophage P22
McNulty R, Lokareddy RK, Roy A, Yang Y, Lander G, Heck AJ, Johnson JE, Cingolani G
J Mol Biol (2015) 427 pp. 3285-3299 [ Pubmed: 26301600 DOI: doi:10.1016/j.jmb.2015.08.013 ]
Electron microscopy of the negatively-stained Cmr complex from Thermus thermophilus HB8.
Staals RH, Agari Y, Maki-Yonekura S, Zhu Y, Taylor DW, van Duijn E, Barendregt A, Vlot M, Koehorst JJ, Sakamoto K, Masuda A, Dohmae N, Schaap PJ, Doudna JA, Heck AJ, Yonekura K, van der Oost J, Shinkai A
Mol Cell (2013) 52 pp. 135-145 [ Pubmed: 24119403 DOI: doi:10.1016/j.molcel.2013.09.013 ]
- Cmr5 (10 kDa, Protein from Thermus thermophilus)
- Cmr6 (40 kDa, Protein from Thermus thermophilus)
- Cmr1 (40 kDa, Protein from Thermus thermophilus)
- Cmr3 (40 kDa, Protein from Thermus thermophilus)
- Crrna (20 kDa, RNA from Thermus thermophilus)
- Cmr2 (65 kDa, Protein from Thermus thermophilus)
- Cmr complex from thermus thermophilus (400 kDa, Sample)
- Cmr4 (30 kDa, Protein from Thermus thermophilus)
Structure and activity of an RNA-targeting Type III-B CRISPER-Cas complex
Staals RH, Agari Y, Maki-Yonekura S, Zhu Y, Taylor DW, van Duijn E, Barendregt A, Vlot M, Koehorst JJ, Sakamoto K, Masuda A, Dohmae N, Schaap PJ, Doudna JA, Heck AJ, Yonekura K, van der Oost J, Shinkai A
Mol Cell (2013) 52 pp. 135-145 [ Pubmed: 24119403 DOI: doi:10.1016/j.molcel.2013.09.013 ]
- Crispr-associated protein cmr3 (39 kDa, Protein from Thermus thermophilus)
- Crispr system cmr subunit cmr5 (12 kDa, Protein from Thermus thermophilus)
- Crispr-associated ramp cmr4 (37 kDa, Protein from Thermus thermophilus)
- Crispr-associated protein tm1791 (38 kDa, Protein from Thermus thermophilus)
- Crispr-associated protein tm1795 (44 kDa, Protein from Thermus thermophilus)
- Type iii-b crispr-cas complex of thermus thermophilus (365 kDa, Sample)
- Crispr rna (RNA from Thermus thermophilus)
- Crispr-associated protein crm2 (65 kDa, Protein from Thermus thermophilus)