Asymmetric unit of bacteriophage PhiM1 mature capsid
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 8vb0
Q-score: 0.578
Eruera AR, Hodgkinson-Bean J, Rutter GL, Hills FR, Kumaran R, Crowe AJM, Jadav N, Chang F, McJarrow-Keller K, Jorge F, Hyun J, Kim H, Ryu B, Bostina M
Pnas Nexus (2024) 3 pp. pgae416-pgae416 [ DOI: doi:10.1093/pnasnexus/pgae416 Pubmed: 39351541 ]
- Alpha-claw decoration protein (gp44) (6 kDa, Protein from Pectobacterium phage PhiM1)
- Alpha-paw decoration protein (gp43) (17 kDa, Protein from Pectobacterium phage PhiM1)
- Pectobacterium phage phim1 (Virus from Pectobacterium phage PhiM1)
- Major capsid protein (gp38) (36 kDa, Protein from Pectobacterium phage PhiM1)
C4 pre-infection ejectosome of the mature bacteriophage PhiM1 particle
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 8vb2
Q-score: 0.498
Eruera AR, Hodgkinson-Bean J, Rutter GL, Hills FR, Kumaran R, Crowe AJM, Jadav N, Chang F, McJarrow-Keller K, Jorge F, Hyun J, Kim H, Ryu B, Bostina M
Pnas Nexus (2024) 3 pp. pgae416-pgae416 [ DOI: doi:10.1093/pnasnexus/pgae416 Pubmed: 39351541 ]
- Octameric ejection protein (gp49) (98 kDa, Protein from Pectobacterium phage PhiM1)
- Ejection protein 3 (gp50) (21 kDa, Protein from Pectobacterium phage PhiM1)
- Pectobacterium phage phim1 (Virus from Pectobacterium phage PhiM1)
- Tetrameric ejection protein (gp48) (135 kDa, Protein from Pectobacterium phage PhiM1)
C12 portal and adaptor complex of the mature bacteriophage PhiM1 particle
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 8vb4
Q-score: 0.534
Eruera AR, Hodgkinson-Bean J, Rutter GL, Hills FR, Kumaran R, Crowe AJM, Jadav N, Chang F, McJarrow-Keller K, Jorge F, Hyun J, Kim H, Ryu B, Bostina M
Pnas Nexus (2024) 3 pp. pgae416-pgae416 [ DOI: doi:10.1093/pnasnexus/pgae416 Pubmed: 39351541 ]
- Portal protein (gp35) (55 kDa, Protein from Pectobacterium phage PhiM1)
- Pectobacterium phage phim1 (Virus from Pectobacterium phage PhiM1)
- Adaptor protein (gp52) (21 kDa, Protein from Pectobacterium phage PhiM1)
C6 nozzle and fibre complex of the mature bacteriophage PhiM1 particle
Resolution: 3.23 Å
EM Method: Single-particle
Fitted PDBs: 8vbx
Q-score: 0.535
Eruera AR, Hodgkinson-Bean J, Rutter GL, Hills FR, Kumaran R, Crowe AJM, Jadav N, Chang F, McJarrow-Keller K, Jorge F, Hyun J, Kim H, Ryu B, Bostina M
Pnas Nexus (2024) 3 pp. pgae416-pgae416 [ DOI: doi:10.1093/pnasnexus/pgae416 Pubmed: 39351541 ]
- Tail nozzle (gp51) (84 kDa, Protein from Pectobacterium phage PhiM1)
- Tail fiber (gp47) (55 kDa, Protein from Pectobacterium phage PhiM1)
- Pectobacterium phage phim1 (Virus from Pectobacterium phage PhiM1)
Asymmetric reconstruction of the PhiM1 tail and ejectosome complexes.
Cryo-EM Structure of Spike Glycoprotein from Civet Coronavirus SZ3 in Closed Conformation
Resolution: 2.11 Å
EM Method: Single-particle
Fitted PDBs: 8tc5
Q-score: 0.651
Hills FR, Eruera AR, Hodgkinson-Bean J, Jorge F, Easingwood R, Brown SHJ, Bouwer JC, Li YP, Burga LN, Bostina M
PLoS Pathog (2024) 20 pp. e1012158-e1012158 [ DOI: doi:10.1371/journal.ppat.1012158 Pubmed: 38805567 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Civet sars cov sz3/2003 (Virus from Civet SARS CoV SZ3/2003)
- Spike glycoprotein (122 kDa, Protein from Civet SARS CoV SZ3/2003)
- Linoleic acid (280 Da, Ligand)
- Water (18 Da, Ligand)
Cryo-EM Structure of Spike Glycoprotein from Bat Coronavirus WIV1 in Closed Conformation
Resolution: 1.88 Å
EM Method: Single-particle
Fitted PDBs: 8tc0
Q-score: 0.639
Hills FR, Eruera AR, Hodgkinson-Bean J, Jorge F, Easingwood R, Brown SHJ, Bouwer JC, Li YP, Burga LN, Bostina M
PLoS Pathog (2024) 20 pp. e1012158-e1012158 [ DOI: doi:10.1371/journal.ppat.1012158 Pubmed: 38805567 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (122 kDa, Protein from Bat SARS-like coronavirus WIV1)
- Linoleic acid (280 Da, Ligand)
- Bat sars-like coronavirus wiv1 (Virus from Bat SARS-like coronavirus WIV1)
- Water (18 Da, Ligand)