Cryo-EM structure of the human EP3-Gi signaling complex
Resolution: 3.375 Å
EM Method: Single-particle
Fitted PDBs: 7wu9
Q-score: 0.466
Suno R, Sugita Y, Morimoto K, Takazaki H, Tsujimoto H, Hirose M, Suno-Ikeda C, Nomura N, Hino T, Inoue A, Iwasaki K, Kato T, Iwata S, Kobayashi T
Cell Rep (2022) 40 pp. 111323-111323 [ DOI: doi:10.1016/j.celrep.2022.111323 Pubmed: 36103815 ]
- Scfv16 (27 kDa, Protein from Mus musculus)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
- Prostaglandine e receptor ep3-gi complex (Complex)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Scfv16 (Complex from Mus musculus)
- Prostaglandin e2 receptor ep3 subtype (36 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Prostaglandine e receptor ep3-gi complex (Complex from Homo sapiens)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6klo
Q-score: 0.586
Yamada T, Yoshida T, Kawamoto A, Mitsuoka K, Iwasaki K, Tsuge H
Nat Struct Mol Biol (2020) 27 pp. 288-296 [ DOI: doi:10.1038/s41594-020-0388-6 Pubmed: 32123390 ]
- Calcium ion (40 Da, Ligand)
- Iota toxin component ib (74 kDa, Protein from Clostridium perfringens)
- Complex structure of iota toxin enzymatic component (ia) and binding component (ib) pore with short stem (570 kDa, Complex from Clostridium perfringens)
- Iota toxin component ia (48 kDa, Protein from Clostridium perfringens)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6klw
Q-score: 0.572
Yamada T, Yoshida T, Kawamoto A, Mitsuoka K, Iwasaki K, Tsuge H
Nat Struct Mol Biol (2020) 27 pp. 288-296 [ Pubmed: 32123390 DOI: doi:10.1038/s41594-020-0388-6 ]
- Complex structure of iota toxin enzymatic component (ia) and binding component (ib) pore with long stem (570 kDa, Complex from Clostridium perfringens)
- Calcium ion (40 Da, Ligand)
- Iota toxin component ib (74 kDa, Protein from Clostridium perfringens)
- Iota toxin component ia (48 kDa, Protein from Clostridium perfringens)
Pore structure of Iota toxin binding component (Ib)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6klx
Q-score: 0.596
Yamada T, Yoshida T, Kawamoto A, Mitsuoka K, Iwasaki K, Tsuge H
Nat Struct Mol Biol (2020) 27 pp. 288-296 [ DOI: doi:10.1038/s41594-020-0388-6 Pubmed: 32123390 ]
- Calcium ion (40 Da, Ligand)
- Iota toxin component ib (74 kDa, Protein from Clostridium perfringens)
- Pore structure of iota toxin binding component (ib) (520 kDa, Complex from Clostridium perfringens)
Cryo-EM structure of multidrug efflux pump MexAB-OprM (0 degree state)
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 6iok
Q-score: 0.456
Tsutsumi K, Yonehara R, Ishizaka-Ikeda E, Miyazaki N, Maeda S, Iwasaki K, Nakagawa A, Yamashita E
Nat Commun (2019) 10 pp. 1520-1520 [ DOI: doi:10.1038/s41467-019-09463-9 Pubmed: 30944318 ]
- Outer membrane protein oprm (51 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Multidrug resistance protein mexa (38 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Multidrug resistance protein mexb (113 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Membrane protein complex (730 kDa, Complex from Pseudomonas aeruginosa)
Cryo-EM structure of multidrug efflux pump MexAB-OprM (60 degree state)
Resolution: 3.76 Å
EM Method: Single-particle
Fitted PDBs: 6iol
Q-score: 0.441
Tsutsumi K, Yonehara R, Ishizaka-Ikeda E, Miyazaki N, Maeda S, Iwasaki K, Nakagawa A, Yamashita E
Nat Commun (2019) 10 pp. 1520-1520 [ Pubmed: 30944318 DOI: doi:10.1038/s41467-019-09463-9 ]
- Membrane protein complex (730 kDa, Complex from Pseudomonas aeruginosa)
- Multidrug resistance protein mexb (113 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Outer membrane protein oprm (51 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Multidrug resistance protein mexa (38 kDa, Protein from Pseudomonas aeruginosa)