Cryo-EM structure of human CD5L bound to IgM-Fc/J
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 8wyr
Q-score: 0.4
Nat Commun (2024) 15 pp. 8397-8397 [ Pubmed: 39333069 DOI: doi:10.1038/s41467-024-52175-y ]
- Calcium ion (40 Da, Ligand)
- Interleukin-2,cd5 antigen-like (39 kDa, Protein from Homo sapiens)
- Interleukin-2,isoform 1 of immunoglobulin heavy constant mu (44 kDa, Protein from Homo sapiens)
- Ternary complex of igm-fc with the j chain and cd5l (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Immunoglobulin j chain (19 kDa, Protein from Homo sapiens)
Local map of human CD5L bound to IgM-Fc/J
Resolution: 3.41 Å
EM Method: Single-particle
Fitted PDBs: 8wys
Q-score: 0.422
Nat Commun (2024) 15 pp. 8397-8397 [ Pubmed: 39333069 DOI: doi:10.1038/s41467-024-52175-y ]
- Calcium ion (40 Da, Ligand)
- Interleukin-2,cd5 antigen-like (39 kDa, Protein from Homo sapiens)
- Interleukin-2,isoform 1 of immunoglobulin heavy constant mu (44 kDa, Protein from Homo sapiens)
- Ternary complex of igm-fc with the j chain and cd5l (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Immunoglobulin j chain (19 kDa, Protein from Homo sapiens)
Cryo-EM structure of human FcmR bound to sIgM
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 7ysg
Q-score: 0.417
Li Y, Shen H, Zhang R, Ji C, Wang Y, Su C, Xiao J
Nature (2023) 615 pp. 907-912 [ Pubmed: 36949194 DOI: doi:10.1038/s41586-023-05835-w ]
- Immunoglobulin heavy constant mu (25 kDa, Protein from Homo sapiens)
- Cryo-em structure of human fcmr bound to sigm (Complex from Homo sapiens)
- Fas apoptotic inhibitory molecule 3 (11 kDa, Protein from Homo sapiens)
- Fas apoptotic inhibitory molecule 3 (Complex)
- Immunoglobulin j chain (15 kDa, Protein from Homo sapiens)
- Secretory component (Complex from Homo sapiens)
- Immunoglobulin j chain (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Immunoglobulin heavy constant mu (Complex from Homo sapiens)
- Secretory component (59 kDa, Protein from Homo sapiens)
Cryo-EM structure of human FcmR bound to IgM-Fc/J
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 7ytc
Q-score: 0.367
Li Y, Shen H, Zhang R, Ji C, Wang Y, Su C, Xiao J
Nature (2023) 615 pp. 907-912 [ Pubmed: 36949194 DOI: doi:10.1038/s41586-023-05835-w ]
- Immunoglobulin heavy constant mu (25 kDa, Protein from Homo sapiens)
- Fcmr (Complex)
- Fas apoptotic inhibitory molecule 3 (11 kDa, Protein from Homo sapiens)
- Cryo-em structure of human fcmr bound to igm-fc/j (Complex from Homo sapiens)
- Immunoglobulin j chain (15 kDa, Protein from Homo sapiens)
- Immunoglobulin j chain (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Immunoglobulin heavy constant mu (Complex from Homo sapiens)
Cryo-EM structure of four human FcmR bound to IgM-Fc/J
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 7ytd
Q-score: 0.317
Li Y, Shen H, Zhang R, Ji C, Wang Y, Su C, Xiao J
Nature (2023) 615 pp. 907-912 [ Pubmed: 36949194 DOI: doi:10.1038/s41586-023-05835-w ]
- Fcmr (Complex)
- Fas apoptotic inhibitory molecule 3 (11 kDa, Protein from Homo sapiens)
- Immunoglobulin heavy constant mu (25 kDa, Protein from Homo sapiens)
- Immunoglobulin j chain (15 kDa, Protein from Homo sapiens)
- Cryo-em structure of four human fcmr bound to igm-fc/j (Complex from Homo sapiens)
- Immunoglobulin j chain (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Immunoglobulin heavy constant mu (Complex from Homo sapiens)