Resolution: 2.77 Å
EM Method: Single-particle
Fitted PDBs: 8j6m
Q-score: 0.587
Zhang J, Zhan C, Fan J, Wu D, Zhang R, Wu D, Chen X, Lu Y, Li M, Lin M, Gong J, Jiang D
Nat Struct Mol Biol (2024) 31 pp. 1095-1104 [ Pubmed: 38664565 DOI: doi:10.1038/s41594-024-01276-9 ]
- Water (18 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- T1 (Complex from Homo sapiens)
- Green fluorescent protein,sid1 transmembrane family member 1 (124 kDa, Protein from Homo sapiens)
- Oleic acid (282 Da, Ligand)
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 8j6o
Q-score: 0.403
Zhang J, Zhan C, Fan J, Wu D, Zhang R, Wu D, Chen X, Lu Y, Li M, Lin M, Gong J, Jiang D
Nat Struct Mol Biol (2024) 31 pp. 1095-1104 [ Pubmed: 38664565 DOI: doi:10.1038/s41594-024-01276-9 ]
- T2 (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Green fluorescent protein (fragment),sid1 transmembrane family member 2 (124 kDa, Protein from Homo sapiens)
Resolution: 2.77 Å
EM Method: Single-particle
Fitted PDBs: 8hip
Q-score: 0.596
Zhang J, Zhan C, Fan J, Wu D, Zhang R, Wu D, Chen X, Lu Y, Li M, Lin M, Gong J, Jiang D
Nat Struct Mol Biol (2024) 31 pp. 1095-1104 [ Pubmed: 38664565 DOI: doi:10.1038/s41594-024-01276-9 ]
- Zinc ion (65 Da, Ligand)
- [(2~{r})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{z})-octadec-9-enoate (717 Da, Ligand)
- Dsrna transporter complex (Complex from Homo sapiens)
- Systemic rna interference defective protein 1 (88 kDa, Protein from Homo sapiens)
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 8hke
Q-score: 0.431
Zhang J, Zhan C, Fan J, Wu D, Zhang R, Wu D, Chen X, Lu Y, Li M, Lin M, Gong J, Jiang D
Nat Struct Mol Biol (2024) 31 pp. 1095-1104 [ Pubmed: 38664565 DOI: doi:10.1038/s41594-024-01276-9 ]
- Rna (37-mer) (11 kDa, RNA from Homo sapiens)
- Dsrna transporter (Complex from Homo sapiens)
- Rna (37-mer) (11 kDa, RNA from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Systemic rna interference defective protein 1 (88 kDa, Protein from Homo sapiens)
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 7xm9
Q-score: 0.449
Zhang J, Shi Y, Huang Z, Li Y, Yang B, Gong J, Jiang D
Nat Struct Mol Biol (2022) 29 pp. 1208-1216 [ DOI: doi:10.1038/s41594-022-00860-1 Pubmed: 36424527 ]
- Sodium channel subunit beta-1,green fluorescent protein (54 kDa, Protein from Aequorea victoria)
- Isoform 3 of sodium channel protein type 9 subunit alpha,green fluorescent protein (255 kDa, Protein from Aequorea victoria)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sodium channel subunit beta-2 (24 kDa, Protein from Homo sapiens)
- Sodium channel complex (Complex from Homo sapiens)
- [(2~{r})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{z})-octadec-9-enoate (717 Da, Ligand)
- (7~{r})-1'-pentylspiro[6~{h}-furo[3,2-f][1,3]benzodioxole-7,3'-indole]-2'-one (351 Da, Ligand)
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 7xmf
Q-score: 0.457
Zhang J, Shi Y, Huang Z, Li Y, Yang B, Gong J, Jiang D
Nat Struct Mol Biol (2022) 29 pp. 1208-1216 [ Pubmed: 36424527 DOI: doi:10.1038/s41594-022-00860-1 ]
- Sodium channel subunit beta-2 (24 kDa, Protein from Homo sapiens)
- 3-[[4-[3-(4-fluoranyl-2-methyl-phenoxy)azetidin-1-yl]pyrimidin-2-yl]amino]-~{n}-methyl-benzamide (407 Da, Ligand)
- Sodium channel subunit beta-1,green fluorescent protein (54 kDa, Protein from Aequorea victoria)
- Sodium channel (Complex from Homo sapiens)
- Isoform 3 of sodium channel protein type 9 subunit alpha,green fluorescent protein (255 kDa, Protein from Aequorea victoria)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 7xmg
Q-score: 0.436
Zhang J, Shi Y, Huang Z, Li Y, Yang B, Gong J, Jiang D
Nat Struct Mol Biol (2022) 29 pp. 1208-1216 [ DOI: doi:10.1038/s41594-022-00860-1 Pubmed: 36424527 ]
- Sodium channel (Complex from Homo sapiens)
- Sodium channel subunit beta-1,green fluorescent protein (54 kDa, Protein from Aequorea victoria)
- Isoform 3 of sodium channel protein type 9 subunit alpha,green fluorescent protein (255 kDa, Protein from Aequorea victoria)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sodium channel subunit beta-2 (24 kDa, Protein from Homo sapiens)
- (1~{z})-~{n}-[2-methyl-3-[(~{e})-[6-[4-[[4-(trifluoromethyloxy)phenyl]methoxy]piperidin-1-yl]-1~{h}-1,3,5-triazin-2-ylidene]amino]phenyl]ethanimidic acid (516 Da, Ligand)
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 7x5v
Q-score: 0.518
Zhang J, Shi Y, Fan J, Chen H, Xia Z, Huang B, Jiang J, Gong J, Huang Z, Jiang D
Nat Commun (2022) 13 pp. 2713-2713 [ Pubmed: 35581266 DOI: doi:10.1038/s41467-022-30400-w ]
- Ion channel (1 kDa, Protein from Emiliania huxleyi)
- Ion channel complex (Complex from Emiliania huxleyi)
- Ion channel,gfp-twinstrep (91 kDa, Protein from Emiliania huxleyi)