Qian Y, Ma Z, Xu Z, Duan Y, Xiong Y, Xia R, Zhu X, Zhang Z, Tian X, Yin H, Liu J, Song J, Lu Y, Zhang A, Guo C, Jin L, Kim WJ, Ke J, Xu F, Huang Z, He Y
Nat Commun (2024) 15 pp. 7644-7644 [ Pubmed: 39223191 DOI: doi:10.1038/s41467-024-52174-z ]
- Cholesterol hemisuccinate (486 Da, Ligand)
- Frizzled-4 (60 kDa, Protein from Homo sapiens)
- Gpcr complex (450 kDa, Complex from Homo sapiens)
- Segment polarity protein dishevelled homolog dvl-2 (79 kDa, Protein from Homo sapiens)
Fzd4/DEP complex (local refined)
Qian Y, Ma Z, Xu Z, Duan Y, Xiong Y, Xia R, Zhu X, Zhang Z, Tian X, Yin H, Liu J, Song J, Lu Y, Zhang A, Guo C, Jin L, Kim WJ, Ke J, Xu F, Huang Z, He Y
Nat Commun (2024) 15 pp. 7644-7644 [ Pubmed: 39223191 DOI: doi:10.1038/s41467-024-52174-z ]
- Frizzled-4 (60 kDa, Protein from Homo sapiens)
- Gpcr complex (450 kDa, Complex from Homo sapiens)
- Segment polarity protein dishevelled homolog dvl-2 (79 kDa, Protein from Homo sapiens)
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8h0x
Q-score: 0.614
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- Biliverdine ix alpha (582 Da, Ligand)
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Linoleic acid (280 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 8h0y
Q-score: 0.59
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- Biliverdine ix alpha (582 Da, Ligand)
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Linoleic acid (280 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8h0z
Q-score: 0.56
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- Biliverdine ix alpha (582 Da, Ligand)
- Linoleic acid (280 Da, Ligand)
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 8h11
Q-score: 0.59
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.44681 Å
EM Method: Single-particle
Fitted PDBs: 8h12
Q-score: 0.547
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- Spike glycoprotein (130 kDa, Protein from Severe acute respiratory syndrome coronavirus)
Structure of SARS-CoV-1 Spike Protein (S/native) at pH 5.5, Closed Conformation
Resolution: 3.14182 Å
EM Method: Single-particle
Fitted PDBs: 8h15
Q-score: 0.578
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
Structure of SARS-CoV-1 Spike Protein (S/native) at pH 5.5, Open Conformation
Resolution: 3.35534 Å
EM Method: Single-particle
Fitted PDBs: 8h16
Q-score: 0.541
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8h10
Q-score: 0.547
Zhang X, Li Z, Zhang Y, Liu Y, Wang J, Liu B, Chen Q, Wang Q, Fu L, Wang P, Zhong X, Jin L, Yan Q, Chen L, He J, Zhao J, Xiong X
Life Sci Alliance (2023) 6 [ DOI: doi:10.26508/lsa.202201796 Pubmed: 37402591 ]
- Biliverdine ix alpha (582 Da, Ligand)
- Linoleic acid (280 Da, Ligand)
- Spike glycoprotein (136 kDa, Protein from Severe acute respiratory syndrome coronavirus)
- Sars-cov-1 spike protein (410 kDa, Complex from Severe acute respiratory syndrome coronavirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)