Accurate computational design of genetically encoded 3D protein crystals
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 8cwy
Q-score: 0.452
Li Z, Wang S, Nattermann U, Bera AK, Borst AJ, Yaman MY, Bick MJ, Yang EC, Sheffler W, Lee B, Seifert S, Hura GL, Nguyen H, Kang A, Dalal R, Lubner JM, Hsia Y, Haddox H, Courbet A, Dowling Q, Miranda M, Favor A, Etemadi A, Edman NI, Yang W, Weidle C, Sankaran B, Negahdari B, Ross MB, Ginger DS, Baker D
Nat Mater (2023) 22 pp. 1556-1563 [ Pubmed: 37845322 DOI: doi:10.1038/s41563-023-01683-1 ]
- T32-15-1 (49 kDa, Protein from synthetic construct)
- T32-15 (Complex from Escherichia coli)
- T32-15-2 (9 kDa, Protein from synthetic construct)
CryoEM Structure of Computationally Designed Nanocage O32-ZL4
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8szz
Q-score: 0.591
Li Z, Wang S, Nattermann U, Bera AK, Borst AJ, Yaman MY, Bick MJ, Yang EC, Sheffler W, Lee B, Seifert S, Hura GL, Nguyen H, Kang A, Dalal R, Lubner JM, Hsia Y, Haddox H, Courbet A, Dowling Q, Miranda M, Favor A, Etemadi A, Edman NI, Yang W, Weidle C, Sankaran B, Negahdari B, Ross MB, Ginger DS, Baker D
Nat Mater (2023) 22 pp. 1556-1563 [ Pubmed: 37845322 DOI: doi:10.1038/s41563-023-01683-1 ]
- O32-zl4 component a (8 kDa, Protein from synthetic construct)
- O32-zl4 (764 kDa, Complex from Thermotoga maritima)
- Sodium ion (22 Da, Ligand)
- O32-zl4 component b (23 kDa, Protein from Thermotoga maritima)
Wang JYJ, Khmelinskaia A, Sheffler W, Miranda MC, Antanasijevic A, Borst AJ, Torres SV, Shu C, Hsia Y, Nattermann U, Ellis D, Walkey C, Ahlrichs M, Chan S, Kang A, Nguyen H, Sydeman C, Sankaran B, Wu M, Bera AK, Carter L, Fiala B, Murphy M, Baker D, Ward AB, King NP
PNAS (2023) 120 pp. e2214556120-e2214556120 [ Pubmed: 36888664 DOI: doi:10.1073/pnas.2214556120 ]
Wang JYJ, Khmelinskaia A, Sheffler W, Miranda MC, Antanasijevic A, Borst AJ, Torres SV, Shu C, Hsia Y, Nattermann U, Ellis D, Walkey C, Ahlrichs M, Chan S, Kang A, Nguyen H, Sydeman C, Sankaran B, Wu M, Bera AK, Carter L, Fiala B, Murphy M, Baker D, Ward AB, King NP
PNAS (2023) 120 pp. e2214556120-e2214556120 [ Pubmed: 36888664 DOI: doi:10.1073/pnas.2214556120 ]
- Kwoca51 (Protein from synthetic construct)
- Kwoca51 (Complex from synthetic construct)
Hsia Y, Mout R, Sheffler W, Edman NI, Vulovic I, Park YJ, Redler RL, Bick MJ, Bera AK, Courbet A, Kang A, Brunette TJ, Nattermann U, Tsai E, Saleem A, Chow CM, Ekiert D, Bhabha G, Veesler D, Baker D
Nat Commun (2021) 12 pp. 2294-2294 [ DOI: doi:10.1038/s41467-021-22276-z Pubmed: 33863889 ]
- D2_wm-01 (Complex from synthetic construct)
- D2_wm-01a (Protein from synthetic construct)
- D2_wm-01b (Protein from synthetic construct)
Hsia Y, Mout R, Sheffler W, Edman NI, Vulovic I, Park YJ, Redler RL, Bick MJ, Bera AK, Courbet A, Kang A, Brunette TJ, Nattermann U, Tsai E, Saleem A, Chow CM, Ekiert D, Bhabha G, Veesler D, Baker D
Nat Commun (2021) 12 pp. 2294-2294 [ DOI: doi:10.1038/s41467-021-22276-z Pubmed: 33863889 ]
- D2_wm-02a (Protein from synthetic construct)
- D2_wm-02 (Complex from synthetic construct)
- D2_wm-02b (Protein from synthetic construct)
Point Group nanocage T_Wm-1606
Hsia Y, Mout R, Sheffler W, Edman NI, Vulovic I, Park YJ, Redler RL, Bick MJ, Bera AK, Courbet A, Kang A, Brunette TJ, Nattermann U, Tsai E, Saleem A, Chow CM, Ekiert D, Bhabha G, Veesler D, Baker D
Nat Commun (2021) 12 pp. 2294-2294 [ DOI: doi:10.1038/s41467-021-22276-z Pubmed: 33863889 ]
- T_wm-1606 (Protein from synthetic construct)
- T_wm-1606 (Complex from synthetic construct)
Point Group nanocage I32_Wm-42
Hsia Y, Mout R, Sheffler W, Edman NI, Vulovic I, Park YJ, Redler RL, Bick MJ, Bera AK, Courbet A, Kang A, Brunette TJ, Nattermann U, Tsai E, Saleem A, Chow CM, Ekiert D, Bhabha G, Veesler D, Baker D
Nat Commun (2021) 12 pp. 2294-2294 [ DOI: doi:10.1038/s41467-021-22276-z Pubmed: 33863889 ]
- I32_wm-42 (Complex from synthetic construct)
- I32_wm-42a (Protein from synthetic construct)
- I32_wm-42b (Protein from synthetic construct)