Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7mi3
Q-score: 0.441
Santarossa CC, Mickolajczyk KJ, Steinman JB, Urnavicius L, Chen N, Hirata Y, Fukase Y, Coudray N, Ekiert DC, Bhabha G, Kapoor TM
Cell Chem Biol (2021) 28 pp. 1460-1473.e15 [ DOI: doi:10.1016/j.chembiol.2021.04.024 Pubmed: 34015309 ]
- Magnesium ion (24 Da, Ligand)
- Fusion protein of dynein and endolysin (304 kDa, Protein from Saccharomyces cerevisiae)
- (8s)-6-(3-bromophenoxy)-2-[1-(4-chlorophenyl)cyclopropyl]-7-hydroxypyrazolo[1,5-a]pyrimidine-3-carbonitrile (481 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dynein motor domain in the presence of a pyrazolo-pyrimidinone-based compound (300 kDa, Complex from Saccharomyces cerevisiae)
Yeast dynein motor domain in the presence of a pyrazolo-pyrimidinone-based compound, Map 1
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7mi6
Q-score: 0.339
Santarossa CC, Mickolajczyk KJ, Steinman JB, Urnavicius L, Chen N, Hirata Y, Fukase Y, Coudray N, Ekiert DC, Bhabha G, Kapoor TM
Cell Chem Biol (2021) 28 pp. 1460-1473.e15 [ DOI: doi:10.1016/j.chembiol.2021.04.024 Pubmed: 34015309 ]
- Magnesium ion (24 Da, Ligand)
- Fusion protein of dynein and endolysin (304 kDa, Protein from Saccharomyces cerevisiae)
- (8s)-6-(3-bromophenoxy)-2-[1-(4-chlorophenyl)cyclopropyl]-7-hydroxypyrazolo[1,5-a]pyrimidine-3-carbonitrile (481 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dynein motor domain in the presence of a pyrazolo-pyrimidinone-based compound (300 kDa, Complex from Saccharomyces cerevisiae)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7mi8
Q-score: 0.427
Santarossa CC, Mickolajczyk KJ, Steinman JB, Urnavicius L, Chen N, Hirata Y, Fukase Y, Coudray N, Ekiert DC, Bhabha G, Kapoor TM
Cell Chem Biol (2021) 28 pp. 1460-1473.e15 [ DOI: doi:10.1016/j.chembiol.2021.04.024 Pubmed: 34015309 ]
Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6xez
Q-score: 0.41
Chen J, Malone B, Llewellyn E, Grasso M, Shelton PMM, Olinares PDB, Maruthi K, Eng ET, Vatandaslar H, Chait BT, Kapoor TM, Darst SA, Campbell EA
Cell (2020) 182 pp. 1560-1573.e13 [ DOI: doi:10.1016/j.cell.2020.07.033 Pubmed: 32783916 ]
- Non-structural protein 8 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Non-structural protein 7 (9 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Template rna (17 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Magnesium ion (24 Da, Ligand)
- Aluminum fluoride (83 Da, Ligand)
- Product rna (11 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Helicase (67 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)
- Rna-directed rna polymerase (106 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 replication/transcription complex bound to nsp13 helicase - nsp13(2)-rtc (Complex from Severe acute respiratory syndrome coronavirus 2)
- Chapso (631 Da, Ligand)
Structure of MZT1/GCP3-NHD and MZT1/GCP6-NHD in the gamma-TuRC lumenal bridge
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6x0u
Q-score: 0.459
Wieczorek M, Huang TL, Urnavicius L, Hsia KC, Kapoor TM
Cell Rep (2020) 31 pp. 107791-107791 [ Pubmed: 32610146 DOI: doi:10.1016/j.celrep.2020.107791 ]
- Mitotic-spindle organizing protein 1 (8 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 6 (200 kDa, Protein from Homo sapiens)
- Gamma-turc lumenal bridge (Complex from Homo sapiens)
- Gamma-tubulin complex component 3 (103 kDa, Protein from Homo sapiens)
Structure of MZT2/GCP-NHD and CDK5Rap2 at position 13 of the gamma-TuRC
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6x0v
Q-score: 0.416
Wieczorek M, Huang TL, Urnavicius L, Hsia KC, Kapoor TM
Cell Rep (2020) 31 pp. 107791-107791 [ Pubmed: 32610146 DOI: doi:10.1016/j.celrep.2020.107791 ]
- Focused refinement gamma-turc density map surrounding positions 12-13 (Complex from Homo sapiens)
- Gamma-tubulin complex component 2 (105 kDa, Protein from Homo sapiens)
- Mitotic-spindle organizing protein 2a (16 kDa, Protein from Homo sapiens)
- Centrosome protein cep215 (215 kDa, Protein from Homo sapiens)
Structure of gamma-tubulin in the native human gamma-tubulin ring complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6v5v
Q-score: 0.444
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ Pubmed: 31862189 DOI: doi:10.1016/j.cell.2019.12.007 ]
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin gamma-1 chain (51 kDa, Protein from Homo sapiens)
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
Structures of GCP4 and GCP5 in the native human gamma-tubulin ring complex
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6v69
Q-score: 0.425
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ Pubmed: 31862189 DOI: doi:10.1016/j.cell.2019.12.007 ]
- Gamma-tubulin complex component 5 (118 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 4 (76 kDa, Protein from Homo sapiens)
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
Structures of GCP2 and GCP3 in the native human gamma-tubulin ring complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6v6b
Q-score: 0.49
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ Pubmed: 31862189 DOI: doi:10.1016/j.cell.2019.12.007 ]
- Gamma-tubulin complex component 2 (105 kDa, Protein from Homo sapiens)
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
- Gamma-tubulin complex component 3 (103 kDa, Protein from Homo sapiens)
Structure of GCP6 in the native human gamma-tubulin ring complex
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6v6c
Q-score: 0.436
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ Pubmed: 31862189 DOI: doi:10.1016/j.cell.2019.12.007 ]
- Gamma-tubulin complex component 6 (200 kDa, Protein from Homo sapiens)
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)