In situ structure of the Caulobacter crescentus S-layer
Resolution: 3.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8bqe
Q-score: 0.505
Zivanov J, Oton J, Ke Z, von Kugelgen A, Pyle E, Qu K, Morado D, Castano-Diez D, Zanetti G, Bharat TAM, Briggs JAG, Scheres SHW
eLife (2022) 11 [ DOI: doi:10.7554/eLife.83724 Pubmed: 36468689 ]
- S-layer protein rsaa (98 kDa, Protein from Caulobacter vibrioides NA1000)
- Caulobacter crescentus s-layer (Cellular component from Caulobacter vibrioides NA1000)
- Calcium ion (40 Da, Ligand)
Cryo-EM structure of SARS-CoV-2 Spike Proteins on intact virions: 3 Closed RBDs
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6zwv
Q-score: 0.402
Ke Z, Oton J, Qu K, Cortese M, Zila V, McKeane L, Nakane T, Zivanov J, Neufeldt CJ, Cerikan B, Lu JM, Peukes J, Xiong X, Krausslich HG, Scheres SHW, Bartenschlager R, Briggs JAG
Nature (2020) 588 pp. 498-502 [ Pubmed: 32805734 DOI: doi:10.1038/s41586-020-2665-2 ]
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6zox
Q-score: 0.477
Xiong X, Qu K, Ciazynska KA, Hosmillo M, Carter AP, Ebrahimi S, Ke Z, Scheres SHW, Bergamaschi L, Grice GL, Zhang Y, Nathan JA, Baker S, James LC, Baxendale HE, Goodfellow I, Doffinger R, Briggs JAG
Nat Struct Mol Biol (2020) 27 pp. 934-941 [ DOI: doi:10.1038/s41594-020-0478-5 Pubmed: 32737467 ]
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6zoy
Q-score: 0.443
Xiong X, Qu K, Ciazynska KA, Hosmillo M, Carter AP, Ebrahimi S, Ke Z, Scheres SHW, Bergamaschi L, Grice GL, Zhang Y, Nathan JA, Baker S, James LC, Baxendale HE, Goodfellow I, Doffinger R, Briggs JAG
Nat Struct Mol Biol (2020) 27 pp. 934-941 [ DOI: doi:10.1038/s41594-020-0478-5 Pubmed: 32737467 ]
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6zoz
Q-score: 0.418
Xiong X, Qu K, Ciazynska KA, Hosmillo M, Carter AP, Ebrahimi S, Ke Z, Scheres SHW, Bergamaschi L, Grice GL, Zhang Y, Nathan JA, Baker S, James LC, Baxendale HE, Goodfellow I, Doffinger R, Briggs JAG
Nat Struct Mol Biol (2020) 27 pp. 934-941 [ DOI: doi:10.1038/s41594-020-0478-5 Pubmed: 32737467 ]
- Spike glycoprotein (138 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Biliverdine ix alpha (582 Da, Ligand)
- Disulphide-stabilized sars-cov-2 spike protein trimer (28 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
Structure of SARS-CoV-2 Spike Protein Trimer (single Arg S1/S2 cleavage site) in Closed State
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6zp0
Q-score: 0.483
Xiong X, Qu K, Ciazynska KA, Hosmillo M, Carter AP, Ebrahimi S, Ke Z, Scheres SHW, Bergamaschi L, Grice GL, Zhang Y, Nathan JA, Baker S, James LC, Baxendale HE, Goodfellow I, Doffinger R, Briggs JAG
Nat Struct Mol Biol (2020) 27 pp. 934-941 [ DOI: doi:10.1038/s41594-020-0478-5 Pubmed: 32737467 ]
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6zp1
Q-score: 0.441
Xiong X, Qu K, Ciazynska KA, Hosmillo M, Carter AP, Ebrahimi S, Ke Z, Scheres SHW, Bergamaschi L, Grice GL, Zhang Y, Nathan JA, Baker S, James LC, Baxendale HE, Goodfellow I, Doffinger R, Briggs JAG
Nat Struct Mol Biol (2020) 27 pp. 934-941 [ DOI: doi:10.1038/s41594-020-0478-5 Pubmed: 32737467 ]
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6zp2
Q-score: 0.507
Xiong X, Qu K, Ciazynska KA, Hosmillo M, Carter AP, Ebrahimi S, Ke Z, Scheres SHW, Bergamaschi L, Grice GL, Zhang Y, Nathan JA, Baker S, James LC, Baxendale HE, Goodfellow I, Doffinger R, Briggs JAG
Nat Struct Mol Biol (2020) 27 pp. 934-941 [ DOI: doi:10.1038/s41594-020-0478-5 Pubmed: 32737467 ]
- Sars-cov-2 spike protein trimer (28 kDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- Linoleic acid (280 Da, Ligand)
- Spike glycoprotein (125 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Biliverdine ix alpha (582 Da, Ligand)