Cryo-EM structure of human SOD1 (WT) amyloid filament
Resolution: 3.39 Å
EM Method: Helical reconstruction
Fitted PDBs: 9jbo
Q-score: 0.475
Baek Y, Kim H, Lee D, Kim D, Jo E, Roh SH, Ha NC
PNAS (2025) 122 pp. e2408582122-e2408582122 [ DOI: doi:10.1073/pnas.2408582122 Pubmed: 39874287 ]
- Superoxide dismutase [cu-zn] (16 kDa, Protein from Homo sapiens)
- Amyloid filament of human wild-type sod1 protein (34 MDa, Complex from Homo sapiens)
Cryo-EM structure of human SOD1 (C6A/C111A) amyloid filament
Resolution: 3.18 Å
EM Method: Helical reconstruction
Fitted PDBs: 9jbp
Q-score: 0.488
Baek Y, Kim H, Lee D, Kim D, Jo E, Roh SH, Ha NC
PNAS (2025) 122 pp. e2408582122-e2408582122 [ DOI: doi:10.1073/pnas.2408582122 Pubmed: 39874287 ]
- Superoxide dismutase [cu-zn] (16 kDa, Protein from Homo sapiens)
- Unassigned poly-alanine model (698 Da, Protein from Homo sapiens)
- Amyloid filament of human c6a/c111a mutant sod1 protein (69 MDa, Complex from Homo sapiens)
Cryo-EM structure of human DICER-pre-miRNA in a dicing state
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 7xw2
Q-score: 0.444
Lee YY, Lee H, Kim H, Kim VN, Roh SH
Nature (2023) 615 pp. 331-338 [ Pubmed: 36813958 DOI: doi:10.1038/s41586-023-05723-3 ]
- Calcium ion (40 Da, Ligand)
- Pre-mirna (Complex)
- Rna (73-mer) (23 kDa, RNA from Homo sapiens)
- Endoribonuclease dicer (218 kDa, Protein from Homo sapiens)
- Human dicer (Complex from Homo sapiens)
- Protein-rna complex of human dicer with pre-mirna (Complex)
Cryo-EM structure of an apo-form of human DICER
Resolution: 4.04 Å
EM Method: Single-particle
Fitted PDBs: 7xw3
Q-score: 0.285
Lee YY, Lee H, Kim H, Kim VN, Roh SH
Nature (2023) 615 pp. 331-338 [ Pubmed: 36813958 DOI: doi:10.1038/s41586-023-05723-3 ]
- Endoribonuclease dicer (218 kDa, Protein from Homo sapiens)
- Monomeric form of human dicer (Complex from Homo sapiens)
Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7fep
Q-score: 0.543
Kim L, Lee BG, Kim M, Kim MK, Kwon DH, Kim H, Brotz-Oesterhelt H, Roh SH, Song HK
EMBO J (2022) 41 pp. e109755-e109755 [ Pubmed: 35593068 DOI: doi:10.15252/embj.2021109755 ]
- Atp-dependent clp protease proteolytic subunit (22 kDa, Protein from Bacillus subtilis)
- Cryo-em structure of bsclpp-adep1 complex at ph 6.5 (Complex)
- Bsclpp (Complex from Bacillus subtilis)
- Adep1 (Complex)
- Adep1 (736 Da, Protein from synthetic construct)
Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7fer
Q-score: 0.443
Kim L, Lee BG, Kim M, Kim MK, Kwon DH, Kim H, Brotz-Oesterhelt H, Roh SH, Song HK
EMBO J (2022) 41 pp. e109755-e109755 [ Pubmed: 35593068 DOI: doi:10.15252/embj.2021109755 ]
- Atp-dependent clp protease proteolytic subunit (22 kDa, Protein from Bacillus subtilis)
- Bsclpp (Complex from Bacillus subtilis)
- Adep1 (Complex)
- Cryo-em structure of bsclpp-adep1 complex at ph 4.2 (Complex)
- Adep1 (736 Da, Protein from synthetic construct)