E.coli PNPase in complex with single 8-oxoG RNA
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 8vah
Q-score: 0.426
Miller LG, Kim W, Schowe S, Taylor K, Han R, Jain V, Park R, Sherman M, Fang J, Ramirez H, Ellington A, Tamamis P, Resendiz MJE, Zhang YJ, Contreras L
PNAS (2024) 121 pp. e2317865121-e2317865121 [ DOI: doi:10.1073/pnas.2317865121 Pubmed: 39495922 ]
- Rna (5'-r(p*ap*cp*ap*(8gm))-3') (1 kDa, RNA from Escherichia coli)
- Polyribonucleotide nucleotidyltransferase (77 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Rna (5'-r(p*ap*ap*ap*ap*ap*ap*a*a*a)-3') (2 kDa, RNA from Escherichia coli)
- Pnpase complexed with single 8-oxo g rna (Complex from Escherichia coli)
E.coli PNPase in complex with double 8-oxoG RNA
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8vak
Q-score: 0.413
Miller LG, Kim W, Schowe S, Taylor K, Han R, Jain V, Park R, Sherman M, Fang J, Ramirez H, Ellington A, Tamamis P, Resendiz MJE, Zhang YJ, Contreras L
PNAS (2024) 121 pp. e2317865121-e2317865121 [ DOI: doi:10.1073/pnas.2317865121 Pubmed: 39495922 ]
- Polyribonucleotide nucleotidyltransferase (77 kDa, Protein from Escherichia coli)
- Pnpase complexed with double 8-oxo g rna (Complex from Escherichia coli)
- Rna (5'-r(p*cp*ap*(8gm)p*(8gm))-3') (1 kDa, RNA from Escherichia coli)
- Rna (5'-r(p*ap*ap*ap*ap*ap*ap*a*a*a)-3') (2 kDa, RNA from Escherichia coli)
Structure of 3A10 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8ez3
Q-score: 0.613
Lei R, Kim W, Lv H, Mou Z, Scherm MJ, Schmitz AJ, Turner JS, Tan TJC, Wang Y, Ouyang WO, Liang W, Rivera-Cardona J, Teo C, Graham CS, Brooke CB, Presti RM, Mok CKP, Krammer F, Dai X, Ellebedy AH, Wu NC
Immunity (2023) 56 pp. 2621- [ Pubmed: 37967533 DOI: doi:10.1016/j.immuni.2023.10.005 ]
- Structure of 3a10 fab in complex with a/moscow/10/1999 (h3n2) influenza virus neuraminidase (Complex from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Light chain of influenza virus neuraminidase antibody 3a10 (11 kDa, Protein from Homo sapiens)
- Heavy chain of influenza virus neuraminidase antibody 3a10 (13 kDa, Protein from Homo sapiens)
- Neuraminidase (42 kDa, Protein from Influenza A virus (A/Moscow/10/1999(H3N2)))
- Alpha-d-mannopyranose (180 Da, Ligand)
Structure of 1F04 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8ez7
Q-score: 0.638
Lei R, Kim W, Lv H, Mou Z, Scherm MJ, Schmitz AJ, Turner JS, Tan TJC, Wang Y, Ouyang WO, Liang W, Rivera-Cardona J, Teo C, Graham CS, Brooke CB, Presti RM, Mok CKP, Krammer F, Dai X, Ellebedy AH, Wu NC
Immunity (2023) 56 pp. 2621- [ Pubmed: 37967533 DOI: doi:10.1016/j.immuni.2023.10.005 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Heavy chain of influenza virus neuraminidase antibody 1f04 (13 kDa, Protein from Homo sapiens)
- Light chain of influenza virus neuraminidase antibody 1f04 (11 kDa, Protein from Homo sapiens)
- Structure of 1f04 fab in complex with a/moscow/10/1999 (h3n2) influenza virus neuraminidase (Complex from Influenza A virus)
- Neuraminidase (42 kDa, Protein from Influenza A virus (A/Moscow/10/1999(H3N2)))
- Alpha-d-mannopyranose (180 Da, Ligand)
Structure of 3C08 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 8ez8
Q-score: 0.571
Lei R, Kim W, Lv H, Mou Z, Scherm MJ, Schmitz AJ, Turner JS, Tan TJC, Wang Y, Ouyang WO, Liang W, Rivera-Cardona J, Teo C, Graham CS, Brooke CB, Presti RM, Mok CKP, Krammer F, Dai X, Ellebedy AH, Wu NC
Immunity (2023) 56 pp. 2621- [ Pubmed: 37967533 DOI: doi:10.1016/j.immuni.2023.10.005 ]
- Structure of 3c08 fab in complex with a/moscow/10/1999 (h3n2) influenza virus neuraminidase (Complex from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Light chain of influenza virus neuraminidase antibody 3c08 (11 kDa, Protein from Homo sapiens)
- Heavy chain of influenza virus neuraminidase antibody 3c08 (13 kDa, Protein from Homo sapiens)
- Neuraminidase (42 kDa, Protein from Influenza A virus (A/Moscow/10/1999(H3N2)))
- Alpha-d-mannopyranose (180 Da, Ligand)