Cargo-loaded Myxococcus xanthus EncA encapsulin engineered pore mutant with T=4 icosahedral symmetry
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 9bc8
Q-score: 0.456
Kwon S, Andreas MP, Giessen TW
ACS Nano (2024) 18 pp. 25740-25753 [ DOI: doi:10.1021/acsnano.4c08186 Pubmed: 39226211 ]
- Encapsulin nanocompartment cargo protein encc (1 kDa, Protein from Myxococcus xanthus DK 1622)
- Cargo-loaded myxococcus xanthus enca encapsulin engineered pore mutant with t=4 icosahedral symmetry (7 MDa, Complex from Myxococcus xanthus DK 1622)
- Myxococcus xanthus enca encapsulin engineered pore mutant with t=4 icosahedral symmetry (Complex from Myxococcus xanthus DK 1622)
- Snap-tag-targeting peptide cargo protein (Complex from Myxococcus xanthus DK 1622)
- Type 1 encapsulin shell protein enca (30 kDa, Protein from Myxococcus xanthus DK 1622)
Myxococcus xanthus EncA encapsulin engineered pore mutant with T=1 icosahedral symmetry
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 9b9i
Q-score: 0.578
Kwon S, Andreas MP, Giessen TW
ACS Nano (2024) 18 pp. 25740-25753 [ DOI: doi:10.1021/acsnano.4c08186 Pubmed: 39226211 ]
Cargo-loaded Myxococcus xanthus EncA encapsulin engineered pore mutant with T=3 icosahedral symmetry
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 9b9q
Q-score: 0.51
Kwon S, Andreas MP, Giessen TW
ACS Nano (2024) 18 pp. 25740-25753 [ DOI: doi:10.1021/acsnano.4c08186 Pubmed: 39226211 ]
- Encapsulin nanocompartment cargo protein encc (1 kDa, Protein from Myxococcus xanthus DK 1622)
- Cargo-loaded myxococcus xanthus enca encapsulin engineered pore mutant with t=3 icosahedral symmetry (5 MDa, Complex from Myxococcus xanthus DK 1622)
- Snap-tag-targeting peptide cargo protein (Complex from Myxococcus xanthus DK 1622)
- Type 1 encapsulin shell protein enca (30 kDa, Protein from Myxococcus xanthus DK 1622)
- Myxococcus xanthus enca encapsulin engineered pore mutant with t=3 icosahedral symmetry (Complex from Myxococcus xanthus DK 1622)
Myxococcus xanthus EncA protein shell with compartmentalized SNAP-tag cargo protein
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 8tk7
Q-score: 0.638
Kwon S, Andreas MP, Giessen TW
J Struct Biol (2023) 215 pp. 108022-108022 [ Pubmed: 37657675 DOI: doi:10.1016/j.jsb.2023.108022 ]
- Type 1 encapsulin shell protein enca (31 kDa, Protein from Myxococcus xanthus DK 1622)
- Snap-tag/encc targeting peptide (Complex from Myxococcus xanthus DK 1622)
- Myxococcus xanthus enca encapsulin shell protein (Complex from Myxococcus xanthus DK 1622)
- Methylated-dna--protein-cysteine methyltransferase (21 kDa, Protein from Homo sapiens)
- Myxococcus xanthus enca protein shell with compartmentalized snap-tag cargo protein (Complex from Myxococcus xanthus DK 1622)
Complex structure of Neuropeptide Y Y2 receptor in complex with PYY(3-36) and Gi
Resolution: 2.95 Å
EM Method: Single-particle
Fitted PDBs: 7yon
Q-score: 0.572
Kang H, Park C, Choi YK, Bae J, Kwon S, Kim J, Choi C, Seok C, Im W, Choi HJ
Structure (2023) 31 pp. 44-57.e6 [ Pubmed: 36525977 DOI: doi:10.1016/j.str.2022.11.010 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Pyy(3-36) (Complex)
- Neuropeptide y receptor type 2 (43 kDa, Protein from Homo sapiens)
- Peptide yy(3-36) (4 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein (Complex)
- Complex structure of pyy(3-36)-y2r-gi-scfv16 (Complex from Homo sapiens)
- Single-chain antibody fv fragment (scfv16) (27 kDa, Protein from Mus musculus)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Scfv16 (Complex from Mus musculus)
- Water (18 Da, Ligand)
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 7yoo
Q-score: 0.531
Kang H, Park C, Choi YK, Bae J, Kwon S, Kim J, Choi C, Seok C, Im W, Choi HJ
Structure (2023) 31 pp. 44-57.e6 [ Pubmed: 36525977 DOI: doi:10.1016/j.str.2022.11.010 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (37 kDa, Protein from Homo sapiens)
- Npy (Complex)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Neuropeptide y (4 kDa, Protein from Homo sapiens)
- Scfv16 (Complex)
- Neuropeptide y receptor type 2 (43 kDa, Protein from Homo sapiens)
- Complex structure of npy-y2r-gi-scfv16 (Complex from Homo sapiens)
- Single-chain antibody fv fragment (scfv16) (27 kDa, Protein from Mus musculus)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein (Complex from Mus musculus)
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi (Consensus map)
Kang H, Park C, Choi YK, Bae J, Kwon S, Kim J, Choi C, Seok C, Im W, Choi HJ
Structure (2023) 31 pp. 44-57.e6 [ Pubmed: 36525977 DOI: doi:10.1016/j.str.2022.11.010 ]
- Npy (Complex)
- Complex structure of npy-y2r-gi-scfv16 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein (Complex from Mus musculus)
- Scfv16 (Complex)
Complex structure of Neuropeptide Y Y2 receptor in complex with NPY and Gi (Focused map on NPY-Y2R)
Kang H, Park C, Choi YK, Bae J, Kwon S, Kim J, Choi C, Seok C, Im W, Choi HJ
Structure (2023) 31 pp. 44-57.e6 [ Pubmed: 36525977 DOI: doi:10.1016/j.str.2022.11.010 ]
- Npy (Complex)
- Complex structure of npy-y2r-gi-scfv16 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein (Complex from Mus musculus)
- Scfv16 (Complex)
Kang H, Park C, Choi YK, Bae J, Kwon S, Kim J, Choi C, Seok C, Im W, Choi HJ
Structure (2023) 31 pp. 44-57.e6 [ Pubmed: 36525977 DOI: doi:10.1016/j.str.2022.11.010 ]
- Npy (Complex)
- Complex structure of npy-y2r-gi-scfv16 (Complex from Homo sapiens)
- Guanine nucleotide-binding protein (Complex from Mus musculus)
- Scfv16 (Complex)