DNA-PKcs, Ku, DNA and LigIV N-BRCT in the NHEJ Long-range synaptic complex
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Dna (30-mer) (DNA from Homo sapiens)
- Xrcc6_human x-ray repair cross-complementing protein 6 (Protein from Homo sapiens)
- Dnli4_human dna ligase 4 (Protein from Homo sapiens)
- Dnapk complex and ligiv n-brct in the long-range synaptic complex of nhej (630 kDa, Complex from Homo sapiens)
- Prkdc_human dna-dependent protein kinase catalytic subunit (Protein from Homo sapiens)
- Dna (31-mer) (DNA from Homo sapiens)
- Xrcc5_human x-ray repair cross-complementing protein 5 (Protein from Homo sapiens)
XLF, XRCC4 and LigIV C-BRCT in the NHEJ Long-range synaptic complex
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Dnli4_human dna ligase 4 (Protein from Homo sapiens)
- Xlf, xrcc4 and ligiv c-brct in the nhej long-range synaptic complex (250 kDa, Complex from Homo sapiens)
- Nhej1_human non-homologous end-joining factor 1 (Protein from Homo sapiens)
- Xrcc4_human dna repair protein xrcc4 (Protein from Homo sapiens)
LigIV catalytic domain and distal Ku in the NHEJ Short-range synaptic complex
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Dnli4_human dna ligase 4 (Protein from Homo sapiens)
- Xrcc6_human x-ray repair cross-complementing protein 6 (Protein from Homo sapiens)
- Dna (26-mer) (DNA from Homo sapiens)
- Dna (5'-d(p*gp*tp*tp*cp*tp*tp*ap*gp*tp*ap*tp*ap*tp*a)-3') (DNA from Homo sapiens)
- Ligiv cata. and distal ku in nhej short-range synaptic complex (220 kDa, Complex from Homo sapiens)
- Xrcc5_human x-ray repair cross-complementing protein 5 (Protein from Homo sapiens)
Proximal Ku in NHEJ Short-range synaptic complex
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Xrcc6_human x-ray repair cross-complementing protein 6 (Protein from Homo sapiens)
- Dna (26-mer) (DNA from Homo sapiens)
- Dna (5'-d(p*tp*ap*tp*ap*tp*ap*cp*tp*ap*ap*gp*ap*ap*c)-3') (DNA from Homo sapiens)
- Proximal ku in nhej short-range synaptic complex (150 kDa, Complex from Homo sapiens)
- Xrcc5_human x-ray repair cross-complementing protein 5 (Protein from Homo sapiens)
XLF, XRCC4 and LigIV BRCT in NHEJ Short-range synaptic complex
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Xlf, xrcc4 and ligiv brct in nhej short-range synaptic complex (280 kDa, Complex from Homo sapiens)
- Dnli4_human dna ligase 4 (Protein from Homo sapiens)
- Nhej1_human non-homologous end-joining factor 1 (Protein from Homo sapiens)
- Xrcc4_human dna repair protein xrcc4 (Protein from Homo sapiens)
NHEJ Short-range synaptic complex
Resolution: 8.4 Å
EM Method: Single-particle
Fitted PDBs: 7lsy
Q-score: 0.015
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Dna (26-mer) (7 kDa, DNA from Homo sapiens)
- Dna ligase 4 (104 kDa, Protein from Homo sapiens)
- Non-homologous end-joining factor 1 (33 kDa, Protein from Homo sapiens)
- Dna repair protein xrcc4 (38 kDa, Protein from Homo sapiens)
- X-ray repair cross-complementing protein 5 (82 kDa, Protein from Homo sapiens)
- Short-range synaptic complex of nhej (720 kDa, Complex)
- Dna (5'-d(p*tp*ap*tp*ap*tp*ap*cp*tp*ap*ap*gp*ap*ap*c)-3') (4 kDa, DNA from Homo sapiens)
- Dna (5'-d(p*gp*tp*tp*cp*tp*tp*ap*gp*tp*ap*tp*ap*tp*a)-3') (4 kDa, DNA from Homo sapiens)
- Dna (5'-d(p*cp*ap*ap*tp*gp*ap*ap*ap*cp*gp*gp*ap*ap*cp*ap*gp*tp*cp*ap*g)-3') (6 kDa, DNA from Homo sapiens)
- Dna (26-mer) (7 kDa, DNA from Homo sapiens)
- X-ray repair cross-complementing protein 6 (68 kDa, Protein from Homo sapiens)
NHEJ Long-range synaptic complex
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7lt3
Q-score: 0.118
Chen S, Lee L, Naila T, Fishbain S, Wang A, Tomkinson AE, Lees-Miller SP, He Y
Nature (2021) 593 pp. 294-298 [ DOI: doi:10.1038/s41586-021-03458-7 Pubmed: 33854234 ]
- Long-range synaptic complex of nhej (1 MDa, Complex from Homo sapiens)
- Dna ligase 4 (104 kDa, Protein from Homo sapiens)
- Non-homologous end-joining factor 1 (33 kDa, Protein from Homo sapiens)
- Dna repair protein xrcc4 (38 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna (31-mer) (9 kDa, DNA from Homo sapiens)
- Dna-dependent protein kinase catalytic subunit (469 kDa, Protein from Homo sapiens)
- X-ray repair cross-complementing protein 6 (69 kDa, Protein from Homo sapiens)
- Unknown peptide (1 kDa, Protein from Homo sapiens)
- X-ray repair cross-complementing protein 5 (82 kDa, Protein from Homo sapiens)
- Dna (30-mer) (9 kDa, DNA from Homo sapiens)