Saccharomyces cerevisiae Prp43 helicase in complex with Pxr1
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 8rdy
Q-score: 0.525
Portugal-Calisto D, Geiger AG, Rabl J, Vadas O, Oborska-Oplova M, Mazur J, Richina F, Klingauf-Nerurkar P, Michel E, Leitner A, Boehringer D, Panse VG
Nat Commun (2024) 15 pp. 10150-10150 [ DOI: doi:10.1038/s41467-024-54584-5 Pubmed: 39578461 ]
- Glutathione s-transferase class-mu 26 kda isozyme,protein pxr1 (42 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Pre-mrna-splicing factor atp-dependent rna helicase prp43 (91 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Saccharomyces cerevisiae prp43-pxr1 complex (Complex from Saccharomyces cerevisiae)
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8piu
Q-score: 0.574
Zdanowicz R, Afanasyev P, Pruska A, Harrison JA, Giese C, Boehringer D, Leitner A, Zenobi R, Glockshuber R
Sci Adv (2024) 10 pp. eadn4582-eadn4582 [ Pubmed: 39018392 DOI: doi:10.1126/sciadv.adn4582 ]
Zdanowicz R, Afanasyev P, Pruska A, Harrison JA, Giese C, Boehringer D, Leitner A, Zenobi R, Glockshuber R
Sci Adv (2024) 10 pp. eadn4582-eadn4582 [ Pubmed: 39018392 DOI: doi:10.1126/sciadv.adn4582 ]
E2/E3BP core of the human pyruvate dehydrogenase complex (map 1; 3.4 A)
Zdanowicz R, Afanasyev P, Pruska A, Harrison JA, Giese C, Boehringer D, Leitner A, Zenobi R, Glockshuber R
Sci Adv (2024) 10 pp. eadn4582-eadn4582 [ Pubmed: 39018392 DOI: doi:10.1126/sciadv.adn4582 ]
E2/E3BP core of the human pyruvate dehydrogenase complex (map 2; 3.7 A)
Zdanowicz R, Afanasyev P, Pruska A, Harrison JA, Giese C, Boehringer D, Leitner A, Zenobi R, Glockshuber R
Sci Adv (2024) 10 pp. eadn4582-eadn4582 [ Pubmed: 39018392 DOI: doi:10.1126/sciadv.adn4582 ]
Human TRiC-PhLP2A complex in the closed state
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 8i1u
Q-score: 0.506
Park J, Kim H, Gestaut D, Lim S, Opoku-Nsiah KA, Leitner A, Frydman J, Roh SH
Nat Commun (2024) 15 pp. 1007-1007 [ Pubmed: 38307855 DOI: doi:10.1038/s41467-024-45242-x ]
- Phosducin-like protein 3 (27 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit beta (57 kDa, Protein from Homo sapiens)
- Complex of tric/cct-phlp2a treated with atp-alfx (1 MDa, Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- T-complex protein 1 subunit eta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- Aluminum fluoride (83 Da, Ligand)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit theta (59 kDa, Protein from Homo sapiens)
- Human tric/cct complex (Complex from Homo sapiens)
- Phlp2a (pdcl3) (Complex)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)
The focused refinement of CCT3-PhLP2A from TRiC-PhLP2A complex in the open state
Resolution: 3.82 Å
EM Method: Single-particle
Fitted PDBs: 8i6j
Q-score: 0.404
Park J, Kim H, Gestaut D, Lim S, Opoku-Nsiah KA, Leitner A, Frydman J, Roh SH
Nat Commun (2024) 15 pp. 1007-1007 [ Pubmed: 38307855 DOI: doi:10.1038/s41467-024-45242-x ]
- Phosducin-like protein 3 (27 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- Complex of tric/cct and phlp2a (1 MDa, Complex from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Tric/cct (Complex)
- Phlp2a (pdcl3) (Complex from Homo sapiens)
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 8bv5
Q-score: 0.357
Khanppnavar B, Schuster D, Lavriha P, Uliana F, Ozel M, Mehta V, Leitner A, Picotti P, Korkhov VM
EMBO Rep (2024) 25 pp. 1513-1540 [ Pubmed: 38351373 DOI: doi:10.1038/s44319-024-00076-y ]
- Adenylate cyclase type 8 (140 kDa, Protein from Bos taurus)
- Guanine nucleotide-binding protein g(s) subunit alpha isoforms short (47 kDa, Protein from Bos taurus)
- G protein alpha s (Complex from Bos taurus)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
- Structure of adenylyl cyclase 8 bound to stimulatory g protein, forskolin, atpalphas, and ca2+/calmodulin in lipid nanodisc (Complex from Bos taurus)
- Calmodulin (Complex from Bos taurus)
- Magnesium ion (24 Da, Ligand)
- Adenylyl cyclase 8 (Complex from Bos taurus)
- Forskolin (410 Da, Ligand)
Human TRiC-PhLP2A complex in the open state
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8i9u
Q-score: 0.286
Park J, Kim H, Gestaut D, Lim S, Opoku-Nsiah KA, Leitner A, Frydman J, Roh SH
Nat Commun (2024) 15 pp. 1007-1007 [ Pubmed: 38307855 DOI: doi:10.1038/s41467-024-45242-x ]
- Phosducin-like protein 3 (27 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit beta (57 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit eta (59 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Homo sapiens)
- Complex of human tric/cct and phlp2a (1 MDa, Complex)
- T-complex protein 1 subunit theta (59 kDa, Protein from Homo sapiens)
- Human tric/cct complex (Complex from Homo sapiens)
- Phlp2a (pdcl3) in human tric/cct complex (Complex from Homo sapiens)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)
The focused refinement of CCT4-PhLP2A from TRiC-PhLP2A complex in the open state
Resolution: 4.22 Å
EM Method: Single-particle
Fitted PDBs: 8i9q
Q-score: 0.318
Park J, Kim H, Gestaut D, Lim S, Opoku-Nsiah KA, Leitner A, Frydman J, Roh SH
Nat Commun (2024) 15 pp. 1007-1007 [ Pubmed: 38307855 DOI: doi:10.1038/s41467-024-45242-x ]
- Complex of human tric/cct-phlp2a (1 MDa, Complex)
- Phosducin-like protein 3 (27 kDa, Protein from Homo sapiens)
- T-complex protein 1 subunit delta from human tric/cct complex (Complex from Homo sapiens)
- Phlp2a (pdcl3) (Complex from Homo sapiens)
- T-complex protein 1 subunit delta (57 kDa, Protein from Homo sapiens)