Cryo-EM structure of Hepatitis B virus surface antigen subviral particle with D2 symmetry
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 8ymj
Q-score: 0.233
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8ymk
Q-score: 0.242
Cryo-EM structure of Hepatitis B virus surface antigen subviral particle with D4 symmetry
Anthrax Toxin Receptor 1-bound spent particles of Seneca Valley Virus in acidic conditions
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 6adl
Q-score: -0.025
Cao L, Zhang R, Liu T, Sun Z, Hu M, Sun Y, Cheng L, Guo Y, Fu S, Hu J, Li X, Yu C, Wang H, Chen H, Li X, Fry EE, Stuart DI, Qian P, Lou Z, Rao Z
PNAS (2018) 115 pp. 13087-13092 [ Pubmed: 30514821 DOI: doi:10.1073/pnas.1814309115 ]
- Vp3 (26 kDa, Protein from Senecavirus A)
- Vp1 (25 kDa, Protein from Senecavirus A)
- Vp2 (27 kDa, Protein from Senecavirus A)
- Anthrax toxin receptor 1 (21 kDa, Protein from Homo sapiens)
- Seneca valley virus (Virus from Seneca valley virus)
- Magnesium ion (24 Da, Ligand)
Adeno-Associated Virus 2 at 2.8 ang
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6ih9
Q-score: 0.396
Adeno-Associated Virus 2 in complex with AAVR
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 6ihb
Q-score: 0.437
Zhang R, Cao L, Cui M, Sun Z, Hu M, Zhang R, Stuart W, Zhao X, Yang Z, Li X, Sun Y, Li S, Ding W, Lou Z, Rao Z
Nat Microbiol (2019) 4 pp. 675-682 [ Pubmed: 30742069 DOI: doi:10.1038/s41564-018-0356-7 ]
- Dyslexia-associated protein kiaa0319-like protein (10 kDa, Protein from Homo sapiens)
- Adeno-associated virus 2 (Complex from Adeno-associated virus 2 (isolate Srivastava/1982))
- Aavr pkd2 (Complex from Homo sapiens)
- Capsid protein vp1 (82 kDa, Protein from Adeno-associated virus 2 (isolate Srivastava/1982))
- Aav2 in complex with aavr (Complex)
Anthrax Toxin Receptor 1-bound full particles of Seneca Valley Virus in acidic conditions
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 6adm
Q-score: -0.027
Cao L, Zhang R, Liu T, Sun Z, Hu M, Sun Y, Cheng L, Guo Y, Fu S, Hu J, Li X, Yu C, Wang H, Chen H, Li X, Fry EE, Stuart DI, Qian P, Lou Z, Rao Z
PNAS (2018) 115 pp. 13087-13092 [ Pubmed: 30514821 DOI: doi:10.1073/pnas.1814309115 ]
- Vp3 (26 kDa, Protein from Seneca valley virus)
- Vp2 (29 kDa, Protein from Seneca valley virus)
- Vp1 (28 kDa, Protein from Seneca valley virus)
- Vp4 (5 kDa, Protein from Seneca valley virus)
- Anthrax toxin receptor 1 (21 kDa, Protein from Homo sapiens)
- Seneca valley virus (Virus from Seneca valley virus)
- Magnesium ion (24 Da, Ligand)
Anthrax Toxin Receptor 1-bound the Seneca Valley Virus in neutral conditions
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 6adr
Q-score: -0.016
Cao L, Zhang R, Liu T, Sun Z, Hu M, Sun Y, Cheng L, Guo Y, Fu S, Hu J, Li X, Yu C, Wang H, Chen H, Li X, Fry EE, Stuart DI, Qian P, Lou Z, Rao Z
PNAS (2018) 115 pp. 13087-13092 [ Pubmed: 30514821 DOI: doi:10.1073/pnas.1814309115 ]
- Vp1 (28 kDa, Protein from Seneca valley virus)
- Vp3 (26 kDa, Protein from Seneca valley virus)
- Anthrax toxin receptor 1 (21 kDa, Protein from Homo sapiens)
- Seneca valley virus (Virus from Seneca valley virus)
- Vp4 (7 kDa, Protein from Seneca valley virus)
- Magnesium ion (24 Da, Ligand)
- Vp2 (29 kDa, Protein from Seneca valley virus)
- Water (18 Da, Ligand)