Cryo-EM structure of the Cas9d-sgRNA-target DNA complex
To Be Published
- A protein (Complex from metagenome)
- Dna (5'-d(p*cp*gp*gp*gp*tp*cp*ap*ap*ap*tp*g)-3') (11 kDa, DNA from metagenome)
- Rna (144-mer) (51 kDa, RNA from metagenome)
- Zinc ion (65 Da, Ligand)
- Dna (32-mer) (11 kDa, DNA from metagenome)
- A protein (86 kDa, Protein from metagenome)
CENP-A/H4 di-tetrasome assembled on alpha-satellite DNA.
Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N
bioRxiv (2025) [ DOI: doi:10.1101/2024.12.31.630874 Pubmed: 39803555 ]
- 2x(cenp-a/h4)2 di-tetrasome assembled on alpha-satellite dna. (200 MDa, Complex from Homo sapiens)
- Histone h3-like centromeric protein a (15 kDa, Protein from Homo sapiens)
- 147 bp human alpha-satellite dna (45 kDa, DNA from Homo sapiens)
- 147 bp alpha-satellite dna (45 kDa, DNA from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
H3/H4 di-tetrasome assembled on alpha-satellite DNA (closed conformation).
Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N
bioRxiv (2025) [ Pubmed: 39803555 DOI: doi:10.1101/2024.12.31.630874 ]
H3/H4 di-tetrasome assembled on alpha-satellite DNA (open conformation).
Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N
bioRxiv (2025) [ Pubmed: 39803555 DOI: doi:10.1101/2024.12.31.630874 ]
CENP-A/H4 tetra-tetrasome assembled on 342 bp alpha-satellite DNA.
Ali-Ahmad A, Mors M, Carrer M, Li X, Bilokapic S, Halic M, Cascella M, Sekulic N
bioRxiv (2025) [ DOI: doi:10.1101/2024.12.31.630874 Pubmed: 39803555 ]
Structure of chanoclavine synthase from Claviceps fusiformis
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 9jdb
Q-score: 0.633
Liu ZW, Wang T, Li X, Shen PP, Huang J-W, Chen C-C, Guo R-T
To Be Published
- Catalase easc (54 kDa, Protein from Claviceps fusiformis)
- Ergot alkaloid synthesis protein c (Complex from Claviceps fusiformis)
- Protoporphyrin ix containing fe (616 Da, Ligand)
the cryo-EM structure of human mini-SNAPc in complex with hU6-1 PSE
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 7xur
Q-score: 0.474
Sun J, Li X, Hou X, Cao S, Cao W, Zhang Y, Song J, Wang M, Wang H, Yan X, Li Z, Roeder RG, Wang W
Nat Commun (2022) 13 pp. 6871-6871 [ DOI: doi:10.1038/s41467-022-34639-1 Pubmed: 36369505 ]
- Snrna-activating protein complex subunit 4 (60 kDa, Protein from Homo sapiens)
- Human mini-snapc (Complex from Homo sapiens)
- Dna (35-mer) (10 kDa, DNA from synthetic construct)
- The complex of human mini-snapc with hu6-1 pse (Complex)
- Dna (35-mer) (10 kDa, DNA from synthetic construct)
- Dna (Complex)
- Snrna-activating protein complex subunit 1 (33 kDa, Protein from Homo sapiens)
- Snrna-activating protein complex subunit 3 (46 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
native alpha-2-macroglobulin monomer
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 7von
Q-score: 0.321
Huang X, Wang Y, Yu C, Zhang H, Ru Q, Li X, Song K, Zhou M, Zhu P
Sci China Life Sci (2022) 65 pp. 2491-2504 [ DOI: doi:10.1007/s11427-022-2139-2 Pubmed: 35781771 ]
- Alpha-2-macroglobulin (160 kDa, Protein from Homo sapiens)
- Native alpha-2-macroglobulin (Tissue from Homo sapiens)
Induced alpha-2-macroglobulin monomer
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7voo
Q-score: 0.314
Huang X, Wang Y, Yu C, Zhang H, Ru Q, Li X, Song K, Zhou M, Zhu P
Sci China Life Sci (2022) 65 pp. 2491-2504 [ DOI: doi:10.1007/s11427-022-2139-2 Pubmed: 35781771 ]
- Alpha-2-macroglobulin (145 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Macroglobulin family protein (Tissue from Homo sapiens)