Cryo-EM structure of SARS-CoV-2 prototype RBD in complex with rabbit ACE2 (local refinement)
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 8wox
Q-score: 0.488
Shi K, Li L, Luo C, Xu Z, Huang B, Ma S, Liu K, Yu G, Gao GF
Mbio (2024) 15 pp. e0298823-e0298823 [ DOI: doi:10.1128/mbio.02988-23 Pubmed: 38112468 ]
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike protein s1 (25 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme (69 kDa, Protein from Oryctolagus cuniculus)
- Sars-cov-2 prototype spike protein in complex with rabbit ace2 (local refined) (Complex from Severe acute respiratory syndrome coronavirus 2)
Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 RBD in complex with rabbit ACE2 (local refinement)
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 8woy
Q-score: 0.479
Shi K, Li L, Luo C, Xu Z, Huang B, Ma S, Liu K, Yu G, Gao GF
Mbio (2024) 15 pp. e0298823-e0298823 [ DOI: doi:10.1128/mbio.02988-23 Pubmed: 38112468 ]
- Spike protein s1 (26 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Cryo-em structure of sars-cov-2 omicron ba.4/5 rbd in complex with rabbit ace2 (local refinement) (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme (69 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of SARS-CoV RBD in complex with rabbit ACE2
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 8woz
Q-score: 0.389
Shi K, Li L, Luo C, Xu Z, Huang B, Ma S, Liu K, Yu G, Gao GF
Mbio (2024) 15 pp. e0298823-e0298823 [ DOI: doi:10.1128/mbio.02988-23 Pubmed: 38112468 ]
- Angiotensin-converting enzyme (69 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Cryo-em structure of sars-cov rbd in complex with rabbit ace2 (Complex from Severe acute respiratory syndrome coronavirus)
- Spike protein s1 (25 kDa, Protein from Severe acute respiratory syndrome coronavirus)
Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with mouse ACE2
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 7wrh
Q-score: 0.468
Li L, Han P, Huang B, Xie Y, Li W, Zhang D, Han P, Xu Z, Bai B, Zhou J, Kang X, Li X, Zheng A, Zhang R, Qiao S, Zhao X, Qi J, Wang Q, Liu K, Gao GF
Cell Discov (2022) 8 pp. 65-65 [ Pubmed: 35821014 DOI: doi:10.1038/s41421-022-00431-0 ]
- Processed angiotensin-converting enzyme 2 (69 kDa, Protein from Homo sapiens)
- Complex of sars-cov-2 omicron ba.1 spike protein with mouse ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse ace2 (Complex)
- Spike glycoprotein (138 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron ba.1 spike protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of SARS-CoV-2 Omicron spike receptor-binding domain in complex with mouse ACE2
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 7wri
Q-score: 0.54
Li L, Han P, Huang B, Xie Y, Li W, Zhang D, Han P, Xu Z, Bai B, Zhou J, Kang X, Li X, Zheng A, Zhang R, Qiao S, Zhao X, Qi J, Wang Q, Liu K, Gao GF
Cell Discov (2022) 8 pp. 65-65 [ DOI: doi:10.1038/s41421-022-00431-0 Pubmed: 35821014 ]
- Mouse ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)
- Spike glycoprotein (137 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Processed angiotensin-converting enzyme 2 (69 kDa, Protein from Mus musculus)
- Complex of sars-cov-2 omicron spike protein with mouse ace2 (Complex from Homo sapiens)
- Sars-cov-2 omicron spike protein (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)