Cryo-EM structure of the dimeric atSPT-ORM1 complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7yjk
Q-score: 0.556
Liu P, Xie T, Wu X, Han G, Gupta SD, Zhang Z, Yue J, Dong F, Gable K, Niranjanakumari S, Li W, Wang L, Liu W, Yao R, Cahoon EB, Dunn TM, Gong X
Sci Adv (2023) 9 pp. eadg0728-eadg0728 [ Pubmed: 36989369 DOI: doi:10.1126/sciadv.adg0728 ]
- Ormdl family protein (18 kDa, Protein from Arabidopsis thaliana)
- Long chain base biosynthesis protein 2a (54 kDa, Protein from Arabidopsis thaliana)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- N-[(2s,3r,4e)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide (650 Da, Ligand)
- Spt-orm1 complex (Complex from Arabidopsis thaliana)
- Long chain base biosynthesis protein 1 (53 kDa, Protein from Arabidopsis thaliana)
- Transmembrane protein, putative (duf3317) (9 kDa, Protein from Arabidopsis thaliana)
Cryo-EM structure of the monomeric atSPT-ORM1 complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7yjm
Q-score: 0.585
Liu P, Xie T, Wu X, Han G, Gupta SD, Zhang Z, Yue J, Dong F, Gable K, Niranjanakumari S, Li W, Wang L, Liu W, Yao R, Cahoon EB, Dunn TM, Gong X
Sci Adv (2023) 9 pp. eadg0728-eadg0728 [ Pubmed: 36989369 DOI: doi:10.1126/sciadv.adg0728 ]
- Ormdl family protein (18 kDa, Protein from Arabidopsis thaliana)
- Atlcb1 (46 kDa, Protein from Arabidopsis thaliana)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- N-[(2s,3r,4e)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide (650 Da, Ligand)
- Spt-orm1 complex (Complex from Arabidopsis thaliana)
- Transmembrane protein, putative (duf3317) (9 kDa, Protein from Arabidopsis thaliana)
- Long chain base biosynthesis protein 2a (54 kDa, Protein from Arabidopsis thaliana)
- Atlcb1 (6 kDa, Protein from Arabidopsis thaliana)
Cryo-EM structure of the monomeric atSPT-ORM1 (ORM1-N17A) complex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7yjn
Q-score: 0.526
Liu P, Xie T, Wu X, Han G, Gupta SD, Zhang Z, Yue J, Dong F, Gable K, Niranjanakumari S, Li W, Wang L, Liu W, Yao R, Cahoon EB, Dunn TM, Gong X
Sci Adv (2023) 9 pp. eadg0728-eadg0728 [ Pubmed: 36989369 DOI: doi:10.1126/sciadv.adg0728 ]
- Transmembrane protein, putative (duf3317) (9 kDa, Protein from Arabidopsis thaliana)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- Spt-orm1 complex (Complex from Arabidopsis thaliana)
- Long chain base biosynthesis protein 1 (6 kDa, Protein from Arabidopsis thaliana)
- Ormdl family protein (18 kDa, Protein from Arabidopsis thaliana)
- Long chain base biosynthesis protein 2a (54 kDa, Protein from Arabidopsis thaliana)
- Long chain base biosynthesis protein 1 (46 kDa, Protein from Arabidopsis thaliana)
Cryo-EM structure of the monomeric atSPT-ORM1 (LCB2a-deltaN5) complex
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7yjo
Q-score: 0.621
Liu P, Xie T, Wu X, Han G, Gupta SD, Zhang Z, Yue J, Dong F, Gable K, Niranjanakumari S, Li W, Wang L, Liu W, Yao R, Cahoon EB, Dunn TM, Gong X
Sci Adv (2023) 9 pp. eadg0728-eadg0728 [ Pubmed: 36989369 DOI: doi:10.1126/sciadv.adg0728 ]
- Ormdl family protein (18 kDa, Protein from Arabidopsis thaliana)
- Atlcb1 (46 kDa, Protein from Arabidopsis thaliana)
- Long chain base biosynthesis protein 2a (53 kDa, Protein from Arabidopsis thaliana)
- N-[(2s,3r,4e)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide (650 Da, Ligand)
- Spt-orm1 complex (Complex from Arabidopsis thaliana)
- [3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-serine (336 Da, Ligand)
- Transmembrane protein, putative (duf3317) (9 kDa, Protein from Arabidopsis thaliana)
- Atlcb1 (6 kDa, Protein from Arabidopsis thaliana)