p97 with I3 substrate in channel
van den Boom J, Marini G, Meyer H, Saibil HR
EMBO J (2023) 42 pp. e113110-e113110 [ DOI: doi:10.15252/embj.2022113110 Pubmed: 37264685 ]
- P97, sds22, pp1 gamma and i3 (Complex from Homo sapiens)
- P97 (Protein from Homo sapiens)
- P37 (Complex from Homo sapiens)
- I3 (Protein from Homo sapiens)
- P37 (Protein from Homo sapiens)
- P97 - substrate complex, map of p97 with part of i3 in channel only (Complex)
- Pp1 gamma (Protein from Homo sapiens)
- Sds22 (Protein from Homo sapiens)
p97-substrate complex with SPI substrate on subunit D
van den Boom J, Marini G, Meyer H, Saibil HR
EMBO J (2023) 42 pp. e113110-e113110 [ DOI: doi:10.15252/embj.2022113110 Pubmed: 37264685 ]
- P97 (Protein from Homo sapiens)
- I3 (Protein from Homo sapiens)
- Pp1 gamma (Protein from Homo sapiens)
- P97 - substrate complex, substrate on subunit d (Complex from Homo sapiens)
- Sds22 (Protein from Homo sapiens)
- P37 adaptor (Protein from Homo sapiens)
p97-SPI substrate complex on subunit E
van den Boom J, Marini G, Meyer H, Saibil HR
EMBO J (2023) 42 pp. e113110-e113110 [ DOI: doi:10.15252/embj.2022113110 Pubmed: 37264685 ]
- P97 (Protein from Homo sapiens)
- P97 spi substrate complex on subunit e (Complex from Homo sapiens)
- I3 (Protein from Homo sapiens)
- Pp1 gamma (Protein from Homo sapiens)
- Sds22 (Protein from Homo sapiens)
- P37 adaptor (Protein from Homo sapiens)
p97 complexed with SPI substrate on subunit C
van den Boom J, Marini G, Meyer H, Saibil HR
EMBO J (2023) 42 pp. e113110-e113110 [ DOI: doi:10.15252/embj.2022113110 Pubmed: 37264685 ]
- P97 (Protein from Homo sapiens)
- I3 (Protein from Homo sapiens)
- P97 with spi substrate complex on subunit c (Complex from Homo sapiens)
- P37 (Protein from Homo sapiens)
- Pp1 gamma (Protein from Homo sapiens)
- Sds22 (Protein from Homo sapiens)
Resolution: 6.1 Å
EM Method: Single-particle
Fitted PDBs: 8b5r
Q-score: 0.245
van den Boom J, Marini G, Meyer H, Saibil HR
EMBO J (2023) 42 pp. e113110-e113110 [ DOI: doi:10.15252/embj.2022113110 Pubmed: 37264685 ]
- Serine/threonine-protein phosphatase pp1-gamma catalytic subunit (37 kDa, Protein from Homo sapiens)
- P97 complex with p37 adaptor and spi substrate (Complex from Homo sapiens)
- I3 sequence being threaded through the p97 channel (1 kDa, Protein from Homo sapiens)
- Ubx domain-containing protein 2b (1 kDa, Protein from Homo sapiens)
- Ubx domain-containing protein 2b (9 kDa, Protein from Homo sapiens)
- Protein phosphatase 1 regulatory subunit 7 (41 kDa, Protein from Homo sapiens)
- Transitional endoplasmic reticulum atpase (90 kDa, Protein from Homo sapiens)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8b6v
Q-score: 0.45
Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry JK, Altier D, Lum A, Scolaro E, Ortega CP, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu AL, Nelson ME, Eswar N, Topf M, Saibil HR
Nat Commun (2023) 14 pp. 4171-4171 [ DOI: doi:10.1038/s41467-023-39891-7 Pubmed: 37443175 ]
- Magnesium ion (24 Da, Ligand)
- Mpf2ba1 22-mer pre-pore (Complex from Pseudomonas monteilii)
- Mpf2ba1 (49 kDa, Protein from Pseudomonas monteilii)
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8b6w
Q-score: 0.446
Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry JK, Altier D, Lum A, Scolaro E, Ortega CP, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu AL, Nelson ME, Eswar N, Topf M, Saibil HR
Nat Commun (2023) 14 pp. 4171-4171 [ DOI: doi:10.1038/s41467-023-39891-7 Pubmed: 37443175 ]
- Magnesium ion (24 Da, Ligand)
- Mpf2ba1 (49 kDa, Protein from Pseudomonas monteilii)
- Mpf2ba1 21-mer pore (Complex from Pseudomonas monteilii)