Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 8vs6
Q-score: 0.577
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200- [ Pubmed: 39288764 DOI: doi:10.1016/j.cell.2024.08.036 ]
- Transforming growth factor beta-3 proprotein (44 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- L-tgf-b3/avb8 complex (100 kDa, Complex)
- Integrin alpha-v (106 kDa, Protein from Homo sapiens)
- L-tgf-b3 (Complex from Homo sapiens)
- Avb8 complex (Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Integrin beta-8 (71 kDa, Protein from Homo sapiens)
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8vsb
Q-score: 0.521
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200- [ Pubmed: 39288764 DOI: doi:10.1016/j.cell.2024.08.036 ]
- Transforming growth factor beta activator lrrc32 (66 kDa, Protein from Homo sapiens)
- L-tgf-b3/garp complex (180 kDa, Complex from Homo sapiens)
- Transforming growth factor beta-3 proprotein (44 kDa, Protein from Homo sapiens)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8vsc
Q-score: 0.483
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200- [ Pubmed: 39288764 DOI: doi:10.1016/j.cell.2024.08.036 ]
- Transforming growth factor beta activator lrrc32 (66 kDa, Protein from Homo sapiens)
- Transforming growth factor beta-1 proprotein (44 kDa, Protein from Homo sapiens)
- L-tgf-b1/garp complex (180 kDa, Complex from Homo sapiens)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8vsd
Q-score: 0.508
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200- [ Pubmed: 39288764 DOI: doi:10.1016/j.cell.2024.08.036 ]
- Integrin beta-8 (39 kDa, Protein from Homo sapiens)
- Avb8/l-tgf-b1/garp complex (180 kDa, Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Transforming growth factor beta activator lrrc32 (61 kDa, Protein from Homo sapiens)
- Transforming growth factor beta-1 proprotein (41 kDa, Protein from Homo sapiens)
- Avb8 complex (Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Integrin alpha-v heavy chain (65 kDa, Protein from Homo sapiens)
- L-tgf-b1/garp complex (Complex from Homo sapiens)
avb8/L-TGF-b1/GARP focused on avb8
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200-6219.e23 [ Pubmed: 39288764 DOI: doi:10.1016/j.cell.2024.08.036 ]
- Avb8/l-tgf-b1/garp complex (180 kDa, Complex)
- Avb8 complex (Complex from Homo sapiens)
- L-tgf-b1/garp complex (Complex from Homo sapiens)
avb8/L-TGF-b1/GARP focused on L-TGF-b1/GARP
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200-6219.e23 [ Pubmed: 39288764 DOI: doi:10.1016/j.cell.2024.08.036 ]
- Avb8/l-tgf-b1/garp complex (180 kDa, Complex)
- Avb8 complex (Complex from Homo sapiens)
- L-tgf-b1/garp complex (Complex from Homo sapiens)
Consensus map of avb8/L-TGF-b1/GARP complex
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200-6219.e23 [ Pubmed: 39288764 DOI: doi:10.1016/j.cell.2024.08.036 ]
- Avb8/l-tgf-b1/garp complex (180 kDa, Complex from Homo sapiens)
- Avb8 complex (Complex from Homo sapiens)
- L-tgf-b1/garp complex (Complex from Homo sapiens)