FAdV-C4 AG234 Aviadenovirus structure, strain AG234
Perez-Illana MP, Schachnner A, Condezo GN, Hernando-Perez M, Martinez M, Marabini R, Hess M, San Martin C
To Be Published
FAdV-C4 AG234 Aviadenovirus structure, strain KR5
Perez-Illana MP, Schachnner A, Condezo GN, Hernando-Perez M, Martinez M, Marabini R, Hess M, San Martin C
To Be Published
- Pre-hexon-linking protein viii (26 kDa, Protein from Fowl aviadenovirus C)
- Fowl aviadenovirus c (Virus from Fowl aviadenovirus C)
- Hexon protein (106 kDa, Protein from Fowl aviadenovirus C)
- Piiia (65 kDa, Protein from Fowl aviadenovirus C)
- Penton protein (57 kDa, Protein from Fowl aviadenovirus C)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9er2
Q-score: 0.448
van den Heuvel D, Rodriguez-Martinez M, van der Meer PJ, Nieto Moreno N, Park J, Kim HS, van Schie JJM, Wondergem AP, D'Souza A, Yakoub G, Herlihy AE, Kashyap K, Boissiere T, Walker J, Mitter R, Apelt K, de Lint K, Kirdok I, Ljungman M, Wolthuis RMF, Cramer P, Scharer OD, Kokic G, Svejstrup JQ, Luijsterburg MS
Cell (2024) 187 pp. 7107- [ DOI: doi:10.1016/j.cell.2024.10.018 Pubmed: 39547229 ]
- Dna-directed rna polymerase subunit beta (133 kDa, Protein from Sus scrofa)
- Rna polymerase ii subunit d (16 kDa, Protein from Sus scrofa)
- Dna excision repair protein ercc-6 (168 kDa, Protein from Homo sapiens)
- Beryllium trifluoride ion (66 Da, Ligand)
- Isoform 1 of inactive serine/threonine-protein kinase 19 (28 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Dna-directed rna polymerase ii subunit rpb3 (31 kDa, Protein from Sus scrofa)
- Rna (5'-r(p*cp*ap*ap*ap*ap*up*cp*gp*ap*gp*ap*gp*gp*a)-3') (4 kDa, RNA from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (14 kDa, Protein from Sus scrofa)
- Nts (16 kDa, DNA from Homo sapiens)
- Transcription elongation factor 1 homolog (7 kDa, Protein from Homo sapiens)
- Dna damage-binding protein 1 (127 kDa, Protein from Homo sapiens)
- Dna excision repair protein ercc-8 (44 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna-directed rna polymerase subunit (19 kDa, Protein from Sus scrofa)
- Rna polymerase ii subunit k (7 kDa, Protein from Sus scrofa)
- Uv-stimulated scaffold protein a (80 kDa, Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit e (24 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb11-a (13 kDa, Protein from Sus scrofa)
- Pol ii-tcr-stk19 (Complex from Homo sapiens)
- Ts (15 kDa, DNA from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase subunit (218 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb9 (14 kDa, Protein from Sus scrofa)
Cryo-EM structure of the transmembrane anti-sigma factor DdvA
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8rot
Q-score: 0.538
Bernal-Bernal D, Pantoja-Uceda D, Lopez-Alonso JP, Lopez-Rojo A, Lopez-Ruiz JA, Galbis-Martinez M, Ochoa-Lizarralde B, Tascon I, Elias-Arnanz M, Ubarretxena-Belandia I, Padmanabhan S
Sci Adv (2024) 10 pp. eadp1053-eadp1053 [ Pubmed: 39454004 DOI: doi:10.1126/sciadv.adp1053 ]
- Chat domain-containing protein (108 kDa, Protein from Myxococcus xanthus)
- Ddva in complex with ddvs (Complex from Myxococcus xanthus)
Symmetry expansion of dimeric transmembrane anti-sigma factor DdvA
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 8rw5
Q-score: 0.577
Bernal-Bernal D, Pantoja-Uceda D, Lopez-Alonso JP, Lopez-Rojo A, Lopez-Ruiz JA, Galbis-Martinez M, Ochoa-Lizarralde B, Tascon I, Elias-Arnanz M, Ubarretxena-Belandia I, Padmanabhan S
Sci Adv (2024) 10 pp. eadp1053-eadp1053 [ Pubmed: 39454004 DOI: doi:10.1126/sciadv.adp1053 ]
- Chat domain-containing protein (108 kDa, Protein from Myxococcus xanthus)
- Ddva in complex with ddvs (Complex from Myxococcus xanthus)
Ben Chaabene R, Martinez M, Bonavoglia A, Maco B, Chang YW, Lentini G, Soldati-Favre D
PLoS Biol (2024) 22 pp. e3002745-e3002745 [ DOI: doi:10.1371/journal.pbio.3002745 Pubmed: 39137211 ]
Toxoplasma gondii apical end with ICMAP1 conditionally knocked down
Dos Santos Pacheco N, Tell I Puig A, Guerin A, Martinez M, Maco B, Tosetti N, Delgado-Betancourt E, Lunghi M, Striepen B, Chang YW, Soldati-Favre D
Nat Commun (2024) 15 pp. 379-379 [ DOI: doi:10.1038/s41467-023-44631-y Pubmed: 38191574 ]
Toxoplasma gondii apical end with ICMAP2 conditionally knocked down
Dos Santos Pacheco N, Tell I Puig A, Guerin A, Martinez M, Maco B, Tosetti N, Delgado-Betancourt E, Lunghi M, Striepen B, Chang YW, Soldati-Favre D
Nat Commun (2024) 15 pp. 379-379 [ DOI: doi:10.1038/s41467-023-44631-y Pubmed: 38191574 ]
Toxoplasma gondii apical end with ICMAP3i conditionally knocked down
Dos Santos Pacheco N, Tell I Puig A, Guerin A, Martinez M, Maco B, Tosetti N, Delgado-Betancourt E, Lunghi M, Striepen B, Chang YW, Soldati-Favre D
Nat Commun (2024) 15 pp. 379-379 [ DOI: doi:10.1038/s41467-023-44631-y Pubmed: 38191574 ]
Toxoplasma gondii apical end with ICMAP3ii conditionally knocked down
Dos Santos Pacheco N, Tell I Puig A, Guerin A, Martinez M, Maco B, Tosetti N, Delgado-Betancourt E, Lunghi M, Striepen B, Chang YW, Soldati-Favre D
Nat Commun (2024) 15 pp. 379-379 [ DOI: doi:10.1038/s41467-023-44631-y Pubmed: 38191574 ]