BG505 SOSIP.v5.2 in complex with rabbit Fab 43A2
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 6vo0
Q-score: 0.435
Nogal B, McCoy LE, van Gils MJ, Cottrell CA, Voss JE, Andrabi R, Pauthner M, Liang CH, Messmer T, Nedellec R, Shin M, Turner HL, Ozorowski G, Sanders RW, Burton DR, Ward AB
Sci Adv (2020) 6 pp. eaba0512-eaba0512 [ Pubmed: 32548265 DOI: doi:10.1126/sciadv.aba0512 ]
- Envelope glycoprotein gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Fab 43a2 (Complex from Oryctolagus cuniculus)
- Bg505 sosip.v5.2 in complex with rabbit fab 43a2 (Complex)
- 43a2 light chain (12 kDa, Protein from Oryctolagus cuniculus)
- Envelope glycoprotein gp120 (53 kDa, Protein from Human immunodeficiency virus 1)
- 43a2 heavy chain (13 kDa, Protein from Oryctolagus cuniculus)
- Bg505 sosip.v5.2 (Complex from Human immunodeficiency virus 1)
HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B
Resolution: 3.86 Å
EM Method: Single-particle
Fitted PDBs: 6u59
Q-score: 0.393
Yang YR, McCoy LE, van Gils MJ, Andrabi R, Turner HL, Yuan M, Cottrell CA, Ozorowski G, Voss J, Pauthner M, Polveroni TM, Messmer T, Wilson IA, Sanders RW, Burton DR, Ward AB
J Virol (2020) 94 [ DOI: doi:10.1128/JVI.01861-19 Pubmed: 31941772 ]
- Hiv-1 b41 sosip.664 in complex with rabbit antibody 13b (570 kDa, Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Rabbit antibody 13b (Complex from Oryctolagus cuniculus)
- Rabbit antibody 13b fragment antigen binding light chain (11 kDa, Protein from Oryctolagus cuniculus)
- Rabbit antibody 13b fragment antigen binding heavy chain (12 kDa, Protein from Oryctolagus cuniculus)
- Sosip.664 gp120,sosip.664 gp120 (58 kDa, Protein from Human immunodeficiency virus 1)
- Sosip.664 gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 b41 sosip.664 (Complex from Human immunodeficiency virus 1)
HIV Env BG505 SOSIP with polyclonal Fabs from immunized rabbit #3417 post-boost#1
Resolution: 4.71 Å
EM Method: Single-particle
Fitted PDBs: 6did
Q-score: 0.23
Bianchi M, Turner HL, Nogal B, Cottrell CA, Oyen D, Pauthner M, Bastidas R, Nedellec R, McCoy LE, Wilson IA, Burton DR, Ward AB, Hangartner L
Immunity (2018) 49 pp. 288-300.e8 [ Pubmed: 30097292 DOI: doi:10.1016/j.immuni.2018.07.009 ]
- Envelope glycoprotein gp160 (54 kDa, Protein from Human immunodeficiency virus 1)
- Envelope glycoprotein gp160 (17 kDa, Protein from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv env bg505 sosip with polyclonal fabs from immunized rabbit #3417 post-boost#1 (Complex from Homo sapiens)
- Monoclonal antibody 10a heavy chain (22 kDa, Protein from Oryctolagus cuniculus)
- Monoclonal antibody 10a light chain (23 kDa, Protein from Oryctolagus cuniculus)
Glutaraldehyde-treated BG505 SOSIP.664 Env in complex with PGV04 Fab
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6crq
Q-score: 0.363
Schiffner T, Pallesen J, Russell RA, Dodd J, de Val N, LaBranche CC, Montefiori D, Tomaras GD, Shen X, Harris SL, Moghaddam AE, Kalyuzhniy O, Sanders RW, McCoy LE, Moore JP, Ward AB, Sattentau QJ
PLoS Pathog (2018) 14 pp. e1006986-e1006986 [ DOI: doi:10.1371/journal.ppat.1006986 Pubmed: 29746590 ]
- Envelope glycoprotein gp160 (53 kDa, Protein from Human immunodeficiency virus 1)
- Envelope glycoprotein gp160 (17 kDa, Protein from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutaraldehyde-treated bg505 sosip.664 env in complex with pgv04 fab (550 kDa, Complex from Human immunodeficiency virus 1)
- Pgv04 vl (23 kDa, Protein from Homo sapiens)
- Pgv04 vh (24 kDa, Protein from Homo sapiens)