Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 7d10
Q-score: 0.501
Zhang S, Zhou J, Zhang Y, Liu T, Friedel P, Zhuo W, Somasekharan S, Roy K, Zhang L, Liu Y, Meng X, Deng H, Zeng W, Li G, Forbush B, Yang M
Commun Biol (2021) 4 pp. 226-226 [ Pubmed: 33597714 DOI: doi:10.1038/s42003-021-01750-w ]
- Palmitic acid (256 Da, Ligand)
- Solute carrier family 12 member 2 (131 kDa, Protein from Homo sapiens)
- Human nkcc1 (Complex from Homo sapiens)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7d14
Q-score: 0.472
Zhang S, Zhou J, Zhang Y, Liu T, Friedel P, Zhuo W, Somasekharan S, Roy K, Zhang L, Liu Y, Meng X, Deng H, Zeng W, Li G, Forbush B, Yang M
Commun Biol (2021) 4 pp. 226-226 [ Pubmed: 33597714 DOI: doi:10.1038/s42003-021-01750-w ]
- Mouse kcc2 (Cellular component from Mus musculus)
- Solute carrier family 12 member 5 (126 kDa, Protein from Mus musculus)
Human Calcium-Sensing Receptor bound with calcium ions
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7dtt
Q-score: 0.442
Ling S, Shi P, Liu S, Meng X, Zhou Y, Sun W, Chang S, Zhang X, Zhang L, Shi C, Sun D, Liu L, Tian C
Cell Res (2021) 31 pp. 383-394 [ DOI: doi:10.1038/s41422-021-00474-0 Pubmed: 33603117 ]
- Full-lenth human calcium-sensing receptor bound with 20 mm calcium ions (Complex from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Extracellular calcium-sensing receptor (123 kDa, Protein from Homo sapiens)
Human Calcium-Sensing Receptor bound with L-Trp
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 7dtu
Q-score: 0.339
Ling S, Shi P, Liu S, Meng X, Zhou Y, Sun W, Chang S, Zhang X, Zhang L, Shi C, Sun D, Liu L, Tian C
Cell Res (2021) 31 pp. 383-394 [ DOI: doi:10.1038/s41422-021-00474-0 Pubmed: 33603117 ]
- Human calcium-sensing receptor bound with l-trp (Complex from Homo sapiens)
- Tryptophan (204 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Extracellular calcium-sensing receptor (123 kDa, Protein from Homo sapiens)
Human Calcium-Sensing Receptor bound with L-Trp and calcium ions
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7dtv
Q-score: 0.483
Ling S, Shi P, Liu S, Meng X, Zhou Y, Sun W, Chang S, Zhang X, Zhang L, Shi C, Sun D, Liu L, Tian C
Cell Res (2021) 31 pp. 383-394 [ DOI: doi:10.1038/s41422-021-00474-0 Pubmed: 33603117 ]
- Extracellular calcium-sensing receptor (123 kDa, Protein from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Tryptophan (204 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human calcium-sensing receptor bound with l-trp and calcium ions (Complex from Homo sapiens)
Human Calcium-Sensing Receptor in the inactive close-close conformation
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7dtw
Q-score: 0.306
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6u8y
Q-score: 0.414
Yu H, Haja DK, Schut GJ, Wu CH, Meng X, Zhao G, Li H, Adams MWW
Nat Commun (2020) 11 pp. 5953-5953 [ Pubmed: 33230146 DOI: doi:10.1038/s41467-020-19697-7 ]
- Duf4040 domain-containing protein (10 kDa, Protein from Pyrococcus furiosus COM1)
- Monovalent cation/h+ antiporter subunit g (13 kDa, Protein from Pyrococcus furiosus COM1)
- Nadh dehydrogenase subunit m (67 kDa, Protein from Pyrococcus furiosus COM1)
- Respiratory membrane complex (Complex from Pyrococcus furiosus)
- Monovalent cation/h+ antiporter subunit c (12 kDa, Protein from Pyrococcus furiosus COM1)
- Iron/sulfur cluster (351 Da, Ligand)
- Nadh dehydrogenase subunit d (44 kDa, Protein from Pyrococcus furiosus COM1)
- Monovalent cation/h+ antiporter subunit f (9 kDa, Protein from Pyrococcus furiosus COM1)
- Nadh dehydrogenase subunit i (24 kDa, Protein from Pyrococcus furiosus COM1)
- Nadh dehydrogenase subunit (33 kDa, Protein from Pyrococcus furiosus COM1)
- Nadh dehydrogenase subunit n (53 kDa, Protein from Pyrococcus furiosus COM1)
- Nadh dehydrogenase subunit b (22 kDa, Protein from Pyrococcus furiosus COM1)
- Nadh dehydrogenase subunit c (20 kDa, Protein from Pyrococcus furiosus COM1)
- Monovalent cation/h+ antiporter subunit b (25 kDa, Protein from Pyrococcus furiosus COM1)
- Monovalent cation/h+ antiporter subunit e (19 kDa, Protein from Pyrococcus furiosus COM1)
Cryo-EM structure of human cannabinoid receptor 2-Gi protein in complex with agonist WIN 55,212-2
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6pt0
Q-score: 0.374
Xing C, Zhuang Y, Xu TH, Feng Z, Zhou XE, Chen M, Wang L, Meng X, Xue Y, Wang J, Liu H, McGuire TF, Zhao G, Melcher K, Zhang C, Xu HE, Xie XQ
Cell (2020) 180 pp. 645- [ Pubmed: 32004460 DOI: doi:10.1016/j.cell.2020.01.007 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (40 kDa, Protein from Homo sapiens)
- Scfv16 (27 kDa, Protein from synthetic construct)
- Cannabinoid receptor 2 (40 kDa, Protein from Homo sapiens)
- Human cannabinoid receptor 2-gi protein (Complex from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (39 kDa, Protein from Homo sapiens)
- {(3r)-5-methyl-3-[(morpholin-4-yl)methyl]-2,3-dihydro[1,4]oxazino[2,3,4-hi]indol-6-yl}(naphthalen-1-yl)methanone (426 Da, Ligand)
Mtb ClpB in complex with ATPgammaS and casein, Conformer 1
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6dju
Q-score: 0.401
Yu H, Lupoli TJ, Kovach A, Meng X, Zhao G, Nathan CF, Li H
PNAS (2018) 115 pp. E9560-E9569 [ Pubmed: 30257943 DOI: doi:10.1073/pnas.1810648115 ]
- Casein polyalanine model (1 kDa, Protein from Bos taurus)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Mtb clpb in complex with atpgammas and casein (Complex from Mycobacterium tuberculosis)
- Chaperone protein clpb (92 kDa, Protein from Mycobacterium tuberculosis)