C1 reconstruction of Tanay virus particle
Okamoto K, Song C, Wang H, Sakaguchi M, Chalkiadaki C, Miyazaki N, Nabeshima T, Morita K, Inoue S, Murata K
J Gen Virol (2023) 104 [ DOI: doi:10.1099/jgv.0.001863 Pubmed: 37309998 ]
- Tanay virus (Virus from Tanay virus)
Capsid structure of Staphylococcus jumbo bacteriophage S6
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7x30
Q-score: 0.458
Koibuchi W, Uchiyama J, Matsuzaki S, Murata K, Iwasaki K, Miyazaki N
To Be Published
- Major structural protein orf12 (59 kDa, Protein from Staphylococcus phage S6)
- Staphylococcus phage s6 (Virus from Staphylococcus phage S6)
- Hoc-like protein orf90 (53 kDa, Protein from Staphylococcus phage S6)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7xoj
Q-score: 0.466
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published
- Groel (Complex from Escherichia coli)
- Udp-glucuronosyltransferase 1a (ugt1a) (Complex from Homo sapiens)
- Chaperonin groel (57 kDa, Protein from Escherichia coli)
- Groel-ugt1a complex (Complex from Escherichia coli)
Cryo-EM structure of double occupied ring (DOR) of GroEL-UGT1A complex at 2.7 Ang. resolution
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7xok
Q-score: 0.464
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published
- Groel (Complex from Escherichia coli)
- Udp-glucuronosyltransferase 1a (ugt1a) (Complex from Homo sapiens)
- Chaperonin groel (57 kDa, Protein from Escherichia coli)
- Double occupied ring (dor) of groel-ugt1a complex (Complex from Escherichia coli)
Cryo-EM structure of single empty ring 2 (SER2) of GroEL-UGT1A complex at 3.2 Ang. resolution
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 7xol
Q-score: 0.432
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published
- Single empty ring 2 (ser2) of groel-ugt1a complex (Complex from Escherichia coli)
- Groel (Complex from Escherichia coli)
- Udp-glucuronosyltransferase 1a (ugt1a) (Complex from Homo sapiens)
- Chaperonin groel (57 kDa, Protein from Escherichia coli)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7xom
Q-score: 0.448
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published
- Groel-ugt1a double occupied ring complex (Complex from Escherichia coli)
- Chaperonin groel (57 kDa, Protein from Escherichia coli)
- Polyalanine model of udp-glucuronosyltransferase 1a (ugt1a) (2 kDa, Protein from Homo sapiens)
- Or(4)-groel-ugt1a containing modeled (polyalanine) ugt1a (Complex from Escherichia coli)
- Udp-glucuronosyltransferase 1a (ugt1a) (Complex from Homo sapiens)
Cryo-EM structure of empty ring subunit 1 (ER1) from single empty ring of GroEL-UGT1A complex
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7xon
Q-score: 0.47
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published
Cryo-EM structure of empty ring subunit 2 (ER2) from GroEL-UGT1A single empty ring complex
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7xoo
Q-score: 0.492
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7xop
Q-score: 0.485
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7xoq
Q-score: 0.478
Stapleton KM, Mizobata T, Miyazaki N, Takatsuji T, Kato T, Iwasaki K, Standley DM, Kawamura T, Nakane T, Takagi J, Mizohata E
To Be Published