C1 reconstruction of Tanay virus particle
Okamoto K, Song C, Wang H, Sakaguchi M, Chalkiadaki C, Miyazaki N, Nabeshima T, Morita K, Inoue S, Murata K
J Gen Virol (2023) 104 [ DOI: doi:10.1099/jgv.0.001863 Pubmed: 37309998 ]
- Tanay virus (Virus from Tanay virus)
Capsid structure of Staphylococcus jumbo bacteriophage S6
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7x30
Q-score: 0.458
Koibuchi W, Uchiyama J, Matsuzaki S, Murata K, Iwasaki K, Miyazaki N
To Be Published
- Major structural protein orf12 (59 kDa, Protein from Staphylococcus phage S6)
- Staphylococcus phage s6 (Virus from Staphylococcus phage S6)
- Hoc-like protein orf90 (53 kDa, Protein from Staphylococcus phage S6)
Overall structure of Helicobacter pylori bacteriophage KHP30
Tail structure of Helicobacter pylori bacteriophage KHP30
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7wmp
Q-score: 0.487
Kamiya R, Uchiyama J, Matsuzaki S, Murata K, Iwasaki K, Miyazaki N
To Be Published
- Adaptor protein gp12 (22 kDa, Protein from Helicobacter phage KHP30)
- Portal protein (69 kDa, Protein from Helicobacter phage KHP30)
- Nozzle protein gp25 (29 kDa, Protein from Helicobacter phage KHP30)
- Helicobacter phage khp (Virus from Helicobacter phage KHP)
Capsid structure of human sapovirus
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7dod
Q-score: 0.525
Miyazaki N, Murakami K, Oka T, Iwasaki K, Katayama K, Murata K
To Be Published
Acidic stable capsid structure of Helicobacter pylori bacteriophage KHP30
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7dn2
Q-score: 0.611
Kamiya R, Uchiyama J, Matsuzaki S, Murata K, Iwasaki K, Miyazaki N
Structure (2022) 30 pp. 300- [ DOI: doi:10.1016/j.str.2021.09.001 Pubmed: 34597601 ]
Acidic stable capsid structure of Helicobacter pylori bacteriophage KHP40
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7dou
Q-score: 0.508
Kamiya R, Uchiyama J, Matsuzaki S, Murata K, Iwasaki K, Miyazaki N
Structure (2022) 30 pp. 300- [ DOI: doi:10.1016/j.str.2021.09.001 Pubmed: 34597601 ]
- Cement protein gp16 (13 kDa, Protein from Helicobacter phage KHP40)
- Helicobacter phage khp (Virus from Helicobacter phage KHP)
Acquired functional capsid structures in metazoan totivirus-like dsRNA virus.
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6s2c
Q-score: 0.532
Okamoto K, Ferreira RJ, Larsson DSD, Maia FRNC, Isawa H, Sawabe K, Murata K, Hajdu J, Iwasaki K, Kasson PM, Miyazaki N
Structure (2020) 28 pp. 888-896.e3 [ Pubmed: 32413288 DOI: doi:10.1016/j.str.2020.04.016 ]
- Capsid protein (91 kDa, Protein from Omono River virus)
- Omono river virus (Virus from Omono River virus)
- Capsid protein (91 kDa, Protein from Omono River virus)
Cryo-EM structure of Murine Norovirus S7 virion with the resting P-domain conformation
Song C, Takai-Todaka R, Miki M, Haga K, Fujimoto A, Ishiyama R, Oikawa K, Yokoyama M, Miyazaki N, Iwasaki K, Murakami K, Katayama K, Murata K
PLoS Pathog (2020) 16 pp. e1008619-e1008619 [ Pubmed: 32614892 DOI: doi:10.1371/journal.ppat.1008619 ]
Cryo-EM structure of Murine Norovirus S7 virion with the rising P-domain conformation
Song C, Takai-Todaka R, Miki M, Haga K, Fujimoto A, Ishiyama R, Oikawa K, Yokoyama M, Miyazaki N, Iwasaki K, Murakami K, Katayama K, Murata K
PLoS Pathog (2020) 16 pp. e1008619-e1008619 [ Pubmed: 32614892 DOI: doi:10.1371/journal.ppat.1008619 ]