Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
Structure of gamma-tubulin in the native human gamma-tubulin ring complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6v5v
Q-score: 0.444
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin gamma-1 chain (51 kDa, Protein from Homo sapiens)
Structures of GCP4 and GCP5 in the native human gamma-tubulin ring complex
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6v69
Q-score: 0.425
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
- Gamma-tubulin complex component 4 (76 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 5 (118 kDa, Protein from Homo sapiens)
Structures of GCP2 and GCP3 in the native human gamma-tubulin ring complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6v6b
Q-score: 0.49
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
- Gamma-tubulin complex component 3 (103 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 2 (105 kDa, Protein from Homo sapiens)
Structure of GCP6 in the native human gamma-tubulin ring complex
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6v6c
Q-score: 0.436
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
- Gamma-tubulin complex component 6 (200 kDa, Protein from Homo sapiens)
Desnity map of lumenal bridge in reconstruction of the native human gamma-tubulin ring complex
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
Density map for overlap region in reconstruction of native human gamma-tubulin ring complex
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
Structure of the native human gamma-tubulin ring complex
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6v6s
Q-score: 0.218
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
- Gamma-tubulin complex component 5 (118 kDa, Protein from Homo sapiens)
- Tubulin gamma-1 chain (51 kDa, Protein from Homo sapiens)
- Unassigned poly-alanine model ("cc") (5 kDa, Protein from Homo sapiens)
- Unassigned poly-alanine model ("lumenal bridge helical bundles") (22 kDa, Protein from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Gamma-tubulin complex component 4 (76 kDa, Protein from Homo sapiens)
- Unassigned poly-alanine chain ("staple") (4 kDa, Protein from Homo sapiens)
- Beta actin (41 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Native human gamma-tubulin ring complex (Complex from Homo sapiens)
- Gamma-tubulin complex component 3 (103 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 2 (105 kDa, Protein from Homo sapiens)
- Unassigned poly-alanine model ("hb") (14 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 6 (200 kDa, Protein from Homo sapiens)
Overall density map of the native human gamma-tubulin ring complex
Wieczorek M, Urnavicius L, Ti SC, Molloy KR, Chait BT, Kapoor TM
Cell (2020) 180 pp. 165-175.e16 [ DOI: doi:10.1016/j.cell.2019.12.007 Pubmed: 31862189 ]
Yeast nucleolar pre-60S ribosomal subunit (state 2)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6c0f
Q-score: 0.339
Sanghai ZA, Miller L, Molloy KR, Barandun J, Hunziker M, Chaker-Margot M, Wang J, Chait BT, Klinge S
Nature (2018) 556 pp. 126-129 [ Pubmed: 29512650 DOI: doi:10.1038/nature26156 ]
- Ribosome biogenesis protein nsa1 (51 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosome biogenesis protein erb1 (89 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Protein mak16 (35 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosome biogenesis protein rlp24 (24 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l13-a (22 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosomal rna-processing protein 15 (28 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l32 (14 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Yeast large subunit processome (Complex from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l6-a (20 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l17-a (20 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l4-a (39 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l15-a (24 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Atp-dependent rna helicase has1 (56 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l37-a (9 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Nucleolar gtp-binding protein 1 (74 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Zinc ion (65 Da, Ligand)
- Eukaryotic translation initiation factor 6 (26 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosome biogenesis protein ssf1 (51 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l16-a (22 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Its2 (74 kDa, RNA from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l23-a (14 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 5.8s rrna (50 kDa, RNA from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l26-a (14 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Brx1-associated peptide (2 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosome biogenesis protein brx1 (33 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l36-a (11 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Protein mak11 (24 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Pescadillo homolog (69 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l18-a (20 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosome biogenesis protein rlp7 (36 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Saccharomyces cerevisiae s288c 35s pre-ribosomal rna miscrna (1 MDa, RNA from Saccharomyces cerevisiae BY4741)
- Ribosome production factor 1 (35 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Rrna-processing protein ebp2 (6 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosome biogenesis protein 15 (25 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Proteasome-interacting protein cic1 (42 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l35-a (13 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l3 (43 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l33-a (12 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosomal rna-processing protein 1 (33 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Ribosomal rna-processing protein 14 (50 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l7-a (27 kDa, Protein from Saccharomyces cerevisiae BY4741)
- Nucleolar protein 16 (26 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l8-a (28 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l14-a (15 kDa, Protein from Saccharomyces cerevisiae BY4741)
- 60s ribosomal protein l20-a (20 kDa, Protein from Saccharomyces cerevisiae BY4741)