Structural basis for the linker histone H5-nucleosome binding and chromatin compaction
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8xjv
Q-score: 0.424
Li W, Hu J, Song F, Yu J, Peng X, Zhang S, Wang L, Hu M, Liu JC, Wei Y, Xiao X, Li Y, Li D, Wang H, Zhou BR, Dai L, Mou Z, Zhou M, Zhang H, Zhou Z, Zhang H, Bai Y, Zhou JQ, Li W, Li G, Zhu P
Cell Res (2024) 34 pp. 707-724 [ Pubmed: 39103524 DOI: doi:10.1038/s41422-024-01009-z ]
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Histone h3.1 (Complex from Xenopus laevis)
- Histone h5 (21 kDa, Protein from Gallus gallus)
- Histone h3 (15 kDa, Protein from Xenopus laevis)
- Widom 601 dna (Complex from synthetic construct)
- Histone h2a (14 kDa, Protein from Xenopus laevis)
- Dna (660 kDa, DNA from synthetic construct)
- Histone h4 (Complex from Xenopus laevis)
- 12x177bp-h5 chromatin (Complex)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Dna (651 kDa, DNA from synthetic construct)
- Histone h2b (Complex from Xenopus laevis)
- Linker histone h5 (Complex from Gallus gallus)
- Histone h2a (Complex from Xenopus laevis)
Structure of 3A10 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8ez3
Q-score: 0.613
Lei R, Kim W, Lv H, Mou Z, Scherm MJ, Schmitz AJ, Turner JS, Tan TJC, Wang Y, Ouyang WO, Liang W, Rivera-Cardona J, Teo C, Graham CS, Brooke CB, Presti RM, Mok CKP, Krammer F, Dai X, Ellebedy AH, Wu NC
Immunity (2023) 56 pp. 2621- [ Pubmed: 37967533 DOI: doi:10.1016/j.immuni.2023.10.005 ]
- Structure of 3a10 fab in complex with a/moscow/10/1999 (h3n2) influenza virus neuraminidase (Complex from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Light chain of influenza virus neuraminidase antibody 3a10 (11 kDa, Protein from Homo sapiens)
- Heavy chain of influenza virus neuraminidase antibody 3a10 (13 kDa, Protein from Homo sapiens)
- Neuraminidase (42 kDa, Protein from Influenza A virus (A/Moscow/10/1999(H3N2)))
- Alpha-d-mannopyranose (180 Da, Ligand)
Structure of 1F04 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8ez7
Q-score: 0.638
Lei R, Kim W, Lv H, Mou Z, Scherm MJ, Schmitz AJ, Turner JS, Tan TJC, Wang Y, Ouyang WO, Liang W, Rivera-Cardona J, Teo C, Graham CS, Brooke CB, Presti RM, Mok CKP, Krammer F, Dai X, Ellebedy AH, Wu NC
Immunity (2023) 56 pp. 2621- [ Pubmed: 37967533 DOI: doi:10.1016/j.immuni.2023.10.005 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Heavy chain of influenza virus neuraminidase antibody 1f04 (13 kDa, Protein from Homo sapiens)
- Light chain of influenza virus neuraminidase antibody 1f04 (11 kDa, Protein from Homo sapiens)
- Structure of 1f04 fab in complex with a/moscow/10/1999 (h3n2) influenza virus neuraminidase (Complex from Influenza A virus)
- Neuraminidase (42 kDa, Protein from Influenza A virus (A/Moscow/10/1999(H3N2)))
- Alpha-d-mannopyranose (180 Da, Ligand)
Structure of 3C08 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 8ez8
Q-score: 0.571
Lei R, Kim W, Lv H, Mou Z, Scherm MJ, Schmitz AJ, Turner JS, Tan TJC, Wang Y, Ouyang WO, Liang W, Rivera-Cardona J, Teo C, Graham CS, Brooke CB, Presti RM, Mok CKP, Krammer F, Dai X, Ellebedy AH, Wu NC
Immunity (2023) 56 pp. 2621- [ Pubmed: 37967533 DOI: doi:10.1016/j.immuni.2023.10.005 ]
- Structure of 3c08 fab in complex with a/moscow/10/1999 (h3n2) influenza virus neuraminidase (Complex from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Light chain of influenza virus neuraminidase antibody 3c08 (11 kDa, Protein from Homo sapiens)
- Heavy chain of influenza virus neuraminidase antibody 3c08 (13 kDa, Protein from Homo sapiens)
- Neuraminidase (42 kDa, Protein from Influenza A virus (A/Moscow/10/1999(H3N2)))
- Alpha-d-mannopyranose (180 Da, Ligand)
Cryo-EM Structure of NINJ1 Filament at 2.75 Angstrom Resolution
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 8sza
Q-score: 0.476
Sahoo B, Mou Z, Liu W, Dubyak G, Dai X
Cell (2025) 188 pp. 292-302.e11 [ Pubmed: 39667936 DOI: doi:10.1016/j.cell.2024.11.021 ]
- Ninjurin-1 (19 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Ninjurin-1 in complex with cholesterol (Cellular component from Homo sapiens)
Cryo-EM Structure of NINJ2 Filament at 3.07 Angstrom Resolution
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 8szb
Q-score: 0.424
Sahoo B, Mou Z, Liu W, Dubyak G, Dai X
Cell (2025) 188 pp. 292-302.e11 [ Pubmed: 39667936 DOI: doi:10.1016/j.cell.2024.11.021 ]
- Cholesterol (386 Da, Ligand)
- Ninjurin-2 in complex with cholesterol (Cellular component from Homo sapiens)
- Ninjurin-2 (18 kDa, Protein from Homo sapiens)